Phocoena sinus (vaquita): 116739948
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Entry
116739948 CDS
T07759
Symbol
SRSF4
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
psiu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116739948 (SRSF4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116739948 (SRSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116739948 (SRSF4)
Spliceosome [BR:
psiu03041
]
Common components
Common spliceosomal components
SR proteins
116739948 (SRSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116739948
NCBI-ProteinID:
XP_032460841
Ensembl:
ENSPSNG00000007490
LinkDB
All DBs
Position
1:complement(22985513..23015732)
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AA seq
463 aa
AA seq
DB search
MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL
CGGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE
GVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSR
KSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKDKSRSPSKDQSRSRSRSA
DKRRSKSKDQAEEKVQNSDSTGKSKSRSPSRQKSKSKSRSRSQERGAPEKRGSVSRGRSQ
EKSLRKSRSRSPGGSRSRSRSKSKDKRKGRKRSRGESRSRSRSRSRRKRGGKRDSKPGGS
KKKKKEDADRSPSRSRSRSGSKEREHAKSESGQREGRGESEDAGTNQETRSRSRSNSKSK
PNLPSESRSRSKSASKTRSRSKSRSRSASRSRSRSRSRSHSRS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggtgtacatcggccgcctgagctaccaggcccgggagcgcgatgtggagcgc
ttctttaagggctacgggaagatcctggaagtggatctgaagaacggatatgggtttgtg
gagtttgatgatctgcgagacgcagatgatgctgtttatgaactgaatggcaaagacctt
tgtggtggatatggttatagaagaagtggccgagataaatatggccctcctacccgcaca
gaatacagacttattgtggagaatttgtcaagtcggtgcagctggcaagacctaaaggat
tatatgcgtcaggcgggagaagtgacctatgcagatgctcacaagggacgcaaaaatgaa
ggggtgattgaatttgtgtcttactctgatatgaaaagagctttggaaaagttagatgga
actgaagtcaatggcagaaaaatcagattagttgaagacaagcctggttctagacgacgc
cggtcctactccaggagccggagtcactcaagatctcgctctcgaagcagacattctcgt
aagagcagaagccgaagcggcagcagcaaaagcagtcattctaagagtagatcccgatcc
aggtcaggctcccgttcccggagcaagagccgcagccgcagccagagccgcagccgcagc
aagaaggacaagagccggagccccagcaaggaccagagccggagccgcagccgcagcgcc
gacaagcgccgcagcaagagcaaggaccaggccgaggagaaggtccagaacagcgacagc
actggcaagtccaagagccgcagccccagcaggcagaaaagcaagagcaaaagcagaagc
cgcagtcaggagaggggcgcgccggagaagcggggcagcgtgagcaggggccggagccag
gagaagagcctgcgtaagagccgcagccgcagcccaggaggcagccgcagccgcagccgc
agcaaaagcaaggacaagaggaaggggaggaagaggagcaggggggagagccgcagccgc
agccgcagccgcagccgcaggaagcgaggcggcaagcgagacagcaagccgggcggcagc
aagaagaagaagaaggaagacgccgaccgctccccgtccagatcgcggtcccgctcgggc
tcgaaggagcgggaacacgccaagtccgagtctggccagagggaaggccgaggggagagt
gaggatgctggcaccaatcaggagacccggtccaggtcgcggtccaattccaaatcaaaa
ccaaacctcccatcagaatcacgctccagatcaaagtccgcgtcaaaaacccgatcccgg
tccaagtctagatccaggtctgcgtccagatcgcgctcccggtctagatccaggtcccac
tcaaggtcctaa
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