Phocoena sinus (vaquita): 116739961
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Entry
116739961 CDS
T07759
Symbol
ABCA3
Name
(RefSeq) ATP-binding cassette sub-family A member 3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116739961 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116739961 (ABCA3)
Transporters [BR:
psiu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116739961 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
AAA_22
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
116739961
NCBI-ProteinID:
XP_032460837
Ensembl:
ENSPSNG00000017431
UniProt:
A0A8C9CEF0
LinkDB
All DBs
Position
15:complement(51507196..51551951)
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AA seq
1703 aa
AA seq
DB search
MAVLRQLALLLWKNYTLQKRKVLVTILELFLPLLFSGILIWLRLKIQSENVPNATLYPGQ
SIRELPLFFSFPPPGATWELAYVPSQSDAVRTVVETVRRMLVINMRARGFPSEKDFEDYV
RYDNRSANVLAAVVFEHAFNHSRDPLPLAVKYHLRFSYTRRNYMWTQTGSFFLRETEGWH
TTSLFPLFPSPGPREPTSPDGGEPGYIREGFLAVQHAVDRAVMQYHANASTHQLFEKLTV
IAKRFPYPPFISDPFLVAIQYQLPLLLMLSFTYTSLSIIRAVVQEKERKLKEYMRMMGLS
SWLHWTAWFLLFFLFLLVTVSFMTLLFCIKVKKNVAVLAHSDPSLVLVFLACFAISSISF
SFMVSTFFSKANVAAAIGGFLYFFMYIPYFFVAPRYNWMTLSQKLFSCLLSNVAMAMGAQ
LIGKFEAKGTGVQWRDLLSPVNVDDDFSFGQVLGMLLLDSVLYSLVTWYVEAIFPGQFGV
PQPWYFFILPSYWCGHPRTVLGKEEEDDDPEKVLRTEYFEAEPEDLVAGIKIKHVSKVFR
VGNKGKAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQD
MAQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSRQKCPEEVKRMLHILSLEDKGDS
RSRFLSGGMRRKLSIGIALIAGSKVLMLDEPTSGMDAISRRAIWDLLQQHKSDHTILLTT
HFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEGISRLVHHH
VPNATLESSAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWAVDSHLCGMMDPTDGVGTLIEENTAVRLNTGL
ALHCQQFWAMFLKKAAYSWREWKMVTAQVLVPLTCITLALLAINYSSEIFDDPLLKLTLA
EYGRTIVPFSVPGTSRLDQQLSEHLKDMLQAEDQEPREVLGDLEEFLIFRASVEGGGFNE
RCLVAASFRDVGERTVVTALFNNQAYHSPATALAIVDNLLFKLLCGPQASIMVSNYPQPR
SALQAAKDQFNEGRKGFDIALNLLFAMAFLSSTFSILAVSERAVQAKHMQFVSGVHVATF
WLSALLWDLMSFLVPSLLLLVVFKAFDVHAFTQDGHVADALLLLMLYGWAIIPLMYLMSF
FFSGAATAYTRLTIFNILSGIATFLVVTIMRIPAVKLEELSRTLDHVFLVLPNHCLGMAV
SSFYENYETRRYCTSSEVAAHYCRKHNIQYQENFYAWSAPGVGRFVTSMATSGFAYLTLL
FLIETDLLWRLKACLCAFQRRRALTEVYTRTSTLPEDQDVVDERNRILAPSLDSLLDTPL
IIKELSKVYEQRAPLLAVDKVSLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDAF
VGGYSISSDIGKMRQRIGYCPQFDALLDHMTGRETLVMYARLRGVPECYIGACVENTLRG
LLLEPHANKLVRTYSGGNKRKLSTGIALLGEPAVIFLDEPSTGMDPVARRLLWDTVARAR
ESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKIRSDRRQ
EALEEFKAFVDLTFPGSVLEDEHQGMVHYHLPGNDLSWAKVFGVLEKAKEKYGMDDYSVS
QISLEQVFLSFAHLQPPVEDEGP
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctcaggcagctggcgctcctgctctggaagaactacactttgcagaagcgg
aaggtcctggtgaccatcttggagctcttcctgcccttgctgttttctgggatcctgatt
tggcttcgcctgaagatccagtcagagaacgtgcccaatgccaccctctaccccggccag
tccatccgggagctgccactgttcttcagcttcccgccaccgggagccacctgggagctc
gcctacgtcccatcccagagtgacgccgtgaggaccgtcgtggagacggtgaggaggatg
ctggtgatcaacatgagagctcgcggcttcccctccgaaaaggactttgaggactacgtc
aggtacgacaaccgctctgccaacgtgctggccgccgtggtgttcgagcatgccttcaac
cacagcagggatcccctgccactggcggtgaaatatcacttacggttcagttacacgcga
agaaattacatgtggacccagacaggctcctttttcctgagagagacagaaggctggcac
accacttccctttttccactcttccccagcccaggaccaagggaacccacatcccctgat
ggcggagaacctgggtatatccgtgagggcttcctggccgtgcagcatgccgtggacagg
gctgtcatgcagtaccacgccaacgcctccacgcaccagctgtttgagaagctcaccgtg
atcgccaagaggttcccttacccgccttttatctcggaccccttcctcgtcgccatccag
taccagcttcccctgctgctcatgctgagcttcacttacacctcactcagcatcatccgg
gctgtcgtgcaagagaaagagaggaaactgaaggaatacatgcgcatgatggggctcagc
agctggctgcactggaccgcatggttcctcctgttcttcctcttcctcctcgtcaccgtc
tccttcatgaccctgctcttctgcatcaaggtgaagaagaatgtggcagtgctcgcgcac
agtgacccctcgctggtgctagtctttctggcctgctttgctatctcttccatctccttc
agcttcatggtcagcactttcttcagcaaagccaacgtggcagcagccatcgggggcttc
ctctacttcttcatgtacatcccttacttcttcgttgcccctcgatacaactggatgacg
cttagccagaagctgttctcctgcctcctgtccaatgttgccatggcaatgggagcccag
ctcataggaaaatttgaagcaaaaggcacaggtgtccagtggcgagacctcctgagtcct
gtcaatgtggacgacgacttctcctttgggcaagtgctcggcatgctattgctagactcc
gtcctctacagcctggtgacctggtatgtggaggccatcttcccaggccagttcggcgtg
ccccagccctggtatttcttcatcctgccctcgtattggtgcgggcacccgaggacagtt
ctagggaaagaggaggaagacgatgaccctgagaaagtgcttaggaccgagtactttgaa
gctgagccagaggacctggtagccgggatcaagatcaagcatgtgtccaaggtgttcaga
gtggggaacaagggcaaggcagctgtcagagacctgaacctgaacctgtatgagggccag
atcactgtcctgctgggccacaacggcgcggggaagactaccaccctctccatgctcact
ggtctctttcccccgaccagtggacgggcatatatcagtggatacgaaatctcccaagat
atggctcagatccggaagagcttgggcctgtgcccgcagcatgatgtcttgtttgacaac
ctgactgttgcagaacacctgtatttctatgctcagctgaaaggcttgtcgcgccagaag
tgccctgaagaagtcaaacgcatgctgcacatcctcagtctggaggacaagggggactcc
cggagcaggttcctgagcggggggatgaggcgcaagctctccatcggcattgccctcatc
gcaggctccaaggtactcatgctggacgagcccacctcaggcatggacgccatctccagg
agggccatctgggaccttcttcagcagcacaaaagtgaccacaccatcctgctgaccacc
cacttcatggatgaggccgacctgctgggggaccgcatcgccatcatggccaagggggag
ctgcagtgctgcgggtcatctctgttcctgaagcagaaatatggcgcaggctaccacatg
acgctggtgaaggagcctcactgcaaccccgagggcatctcccggctggtccaccaccat
gtccccaacgccaccctggagagcagtgccggagcagagctgtcgttcattcttcccaag
gagagcacacacaggtttgaaagtctttttgctaaactggagaagaagcagaaggagctg
ggcatcgccagcttcggggcctctgtcaccaccatggaggaagtcttcctgcgggttggt
aagctggtggacaccagcatggacatccaagccatccagctccctgccctgcagtaccag
cacgagaggcgggcgagtgactgggccgtggacagccacctgtgcgggatgatggacccg
actgacggcgtcggcaccctgattgaggagaacactgccgtcaggctcaacaccgggctg
gccctccactgccagcagttctgggccatgttcctgaagaaggccgcatacagctggcgg
gagtggaagatggtaacggcccaggtcctggtgcctctgacatgcatcaccctggccctc
ctggccatcaactactcctccgagatcttcgatgaccccctcctgaagctgaccttggcc
gagtatggcagaaccatcgtgcccttctcggttcccgggacctctcggctggatcagcag
ctgtcagagcatttgaaagacatgctgcaggctgaggaccaggaacctcgagaggtgctg
ggtgacctggaggagttcctgattttcagggcctcggtggaggggggcggctttaacgag
cggtgcctggtggcagcatccttcagagacgtgggcgagcgcacggtggtcactgccctg
ttcaacaaccaggcataccactcgccggccaccgcactggccatcgtggacaaccttctg
ttcaagctgctgtgcggccctcaggcctccatcatggtctccaactaccctcagccccgg
agtgccctgcaggccgccaaggatcagttcaacgagggccggaagggattcgacatcgcc
ctcaacttgctcttcgccatggcgttcttgtccagcacgttctccatcctggcggtcagt
gagagggccgtccaggccaagcacatgcagtttgtgagcggagtccacgtggctactttc
tggctctcagctctgctgtgggacctcatgtccttcctcgtccccagtctgctgctgctg
gtggtgttcaaagccttcgacgtgcacgccttcacgcaggacggccacgtggccgacgcc
ctgctgctgctcatgctctatggctgggccatcatccccctcatgtacctgatgagcttc
tttttctcgggggcggccactgcctacacgaggctgaccatattcaacatcttgtcgggc
atcgccactttcctcgtggtcaccatcatgcgcatcccagcggtcaagttagaagaactt
tccagaaccctggaccacgtgttcctggtgctgcccaaccactgtttggggatggcggtc
agcagcttctacgagaactacgagacaaggaggtactgcacctcctccgaagtggcagcc
cactactgccggaaacacaacatccagtaccaggagaacttctatgcatggagcgctcca
ggggttggcaggttcgtgacctccatggctacctcagggtttgcctacctcaccctgctc
ttcctcattgagactgatctgctgtggaggctgaaggcctgcctgtgtgccttccagagg
aggcgggcgctgacagaagtgtacacccggacgtcgacgcttcctgaagaccaggatgtg
gtggatgagaggaaccgcatcctggcccccagcctggactccctgctggacacgcctctg
attatcaaggagctctccaaggtgtatgagcagcgagcgcccctcctcgccgtggacaag
gtctccctcgcagtccagaaaggggagtgctttggcctgctgggtttcaatggagccggc
aaaaccacgactttcaaaatgctgaccggggaggagaccattacttctggggacgccttt
gttgggggctacagcattagctctgatatcgggaagatgcggcagcggattggctactgc
ccccagtttgatgccctgctggaccacatgacgggccgggagacactggtcatgtacgcc
cggctccggggtgtccccgagtgctacatcggcgcctgtgtggagaacacgctgcggggc
ttgctcctggagccgcatgccaacaagctggtcaggacatatagcggcggcaacaagcgg
aagctcagcaccggcattgcccttcttggagagccagcagtaatcttcctggatgagccg
tccactggcatggaccccgtggcccggcgcctgctctgggacaccgtggcaagggcccgc
gagtctggaaaggccatcgtcatcacctcccacagcatggaggagtgtgaggccttgtgc
acccggctggccatcatggtgcagggtcagttcaagtgcctgggcagcccacagcacctc
aagagcaagtttggcagtggctactccctacgggccaagatccggagtgacaggcggcag
gaggccctggaagagttcaaggcattcgtggacctgaccttcccaggcagcgtcctggaa
gatgagcaccaagggatggtccattaccacctgcctggcaatgacctcagctgggcgaag
gtgtttggtgttctggagaaggccaaggagaagtatggcatggacgactactctgtgagc
cagatctcgctggagcaggtcttcctgagcttcgcccacctgcagccacctgttgaggac
gaggggccgtga
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integrated database retrieval system
