Phocoena sinus (vaquita): 116739992
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Entry
116739992 CDS
T07759
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04136
Autophagy - other
psiu04140
Autophagy - animal
psiu05010
Alzheimer disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116739992 (WIPI2)
04136 Autophagy - other
116739992 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116739992 (WIPI2)
05014 Amyotrophic lateral sclerosis
116739992 (WIPI2)
05016 Huntington disease
116739992 (WIPI2)
05017 Spinocerebellar ataxia
116739992 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
116739992 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116739992 (WIPI2)
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116739992 (WIPI2)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116739992 (WIPI2)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116739992 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
ANAPC4_WD40
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
EIF3I
Beta-prop_IFT140_1st
VID27
Motif
Other DBs
NCBI-GeneID:
116739992
NCBI-ProteinID:
XP_032460924
Ensembl:
ENSPSNG00000017206
UniProt:
A0A8C9CP26
LinkDB
All DBs
Position
15:complement(84577234..84611967)
Genome browser
AA seq
436 aa
AA seq
DB search
MNLASQSGEAGASQLLFANFNQDVTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFST
DGVFLSTSSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICALATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKLDGS
METTNEILDSTSHDCPLVTQTYSTAVAKGPHVPSSPTALAYADELGAVGGAGLEDEARAL
RLEDDSEQPPMILRTD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagtcagagtggcgaggctggcgctagccagctactcttcgccaacttc
aaccaagacgtcacgtctctagctgttggtagtaaatccggttataaatttttctccctt
tcttctgtggataaactggaacagatctatgaatgcactgacactgaagatgtgtgcatc
gtggaaaggttgttctcaagcagcttggtggccatcgttagcctcaaagcccccaggaag
ctgaaggtttgccactttaagaaggggaccgagatctgcaactacagctactccaacacc
atcctggctgtgaagctgaacaggcagaggctgatcgtgtgcctggaggagtctctgtat
atacacaacatccgggacatgaaggtgctgcacaccatccgggagacgcccccaaacccc
gcaggcctgtgtgcgctgtccatcaacaacgacaactgttacctggcgtatccaggcagc
gcgaccatcggggaggtgcaggtcttcgacaccatcaacctgagagctgcaaacatgatc
ccggctcacgacagccctttagccgcactggccttcgacgccagcggaaccaagctcgcc
actgcttccgagaaggggaccgtgattagggtattttccattccagaaggacaaaaactc
ttcgagttccggagaggagtgaagaggtgtgtgagcatctgctccctggccttcagcacg
gacggcgtgttcctgtccacctccagcaacacggagactgtgcacatcttcaagctcgag
actgtgaaagaaaagcctcaggaggagcccaccacctggaccggctacttcgggaaggtg
ctcatggcgtccaccagctacttgccctcccaagtgacagaaatgttcaaccagggcaga
gcctttgccacagtccgcctgcctttctgtggccacaagaacatctgtgcgctggccaca
atccagaagattccccgattgctggtgggagcctcggacgggtacttgtacatgtacaat
ctggacccccaggaggggggagagtgcaccttgatgaaacagcacaagttggacggcagc
atggagacgaccaatgagatcctagactccacgtcccacgactgccccttggtgacgcag
acgtacagcacggccgtggccaagggtcctcacgtgccttcgtccccaacggcactggcc
tatgcagacgagctgggcgcggtgggcggcgcaggcctggaggacgaggcccgcgccctg
cggctggaggacgacagcgagcagcctcccatgatcctccggacagactga
DBGET
integrated database retrieval system
