Phocoena sinus (vaquita): 116740056
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Entry
116740056 CDS
T07759
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116740056 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116740056 (TAF6)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116740056 (TAF6)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116740056 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
116740056 (TAF6)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116740056 (TAF6)
STAGA complex
116740056 (TAF6)
TFTC complex
116740056 (TAF6)
SAGA complex
116740056 (TAF6)
SLIK complex
116740056 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Bromo_TP
TFIID-18kDa
Histone
Motif
Other DBs
NCBI-GeneID:
116740056
NCBI-ProteinID:
XP_032461091
Ensembl:
ENSPSNG00000011326
LinkDB
All DBs
Position
15:81670588..81679184
Genome browser
AA seq
710 aa
AA seq
DB search
MTASCISGSRHRGLHLSALGHLPSGEGRRGSRMAEEKKLKLSNTVLPSESMKVVAESMGI
AQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHA
QEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPEN
PPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATPADGKGKEKKAPPLLEGAPLRL
KPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVR
VNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWA
LRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVI
KTLILPRLQQEGERIRGVLDGPVLSNIDRIGADHVQSLLLKHCAPVLAKLRPPPDNQDAY
RAEFGSLGPLLCSHVVKARAQAALQAQQVNRTTLTITQPRPTLTLSQAPQPGPRTPGLLK
VPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSASSTQQVLSLSTSAPGSGSTTT
SPVTTTVPSVQPIVKLVSTATSAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPA
PPPTSAPSPLGVSALCGGKLEAGESPPPAPGTPKANGSQPPGCGSPPPAP
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctcctgtatatccggctccaggcacagaggtctccatctctccgccctgggg
catcttccttcaggggaggggaggaggggctccagaatggctgaggagaagaagctgaag
ctgagcaacaccgtgctgccctcggagtccatgaaggtggtggccgagtccatgggcatc
gctcagattcaggaggagacctgccagctgctgacagatgaggtcagctaccgcatcaag
gagattgcacaggatgccttgaagttcatgcacatggggaagcggcagaagctcaccacc
agtgacattgactacgcactgaaactaaagaacgtcgagccactgtatggcttccacgct
caggagttcattcctttccgtttcgcctctggtggcggccgggagctttacttctacgag
gagaaggaggttgatctgagcgacatcatcaatactcctctgccccgagtgcccctggat
gtctgcctcaaagctcactggctgagcattgaaggctgccagccagctattccagagaac
ccacccccagctcccaaagagcagcagaaggctgaggccacagaacccctgaagtccgcc
aagccaggccaggaggaagacggccccttgaaaggcaaagggcagggggccactccagct
gacggcaaagggaaagagaagaaggcaccacccctgctggagggggcgcctctgcgactg
aagccccgaagcatccacgagttgtctgtggagcagcagctgtactacaaggagatcaca
gaagcctgtgtgggctcatgtgaggccaagagagcggaggctctgcagagcattgccacg
gatccagggctctaccagatgctgccacgcttcagcaccttcatctcagagggggtgcgc
gtgaacgtggtgcagaacaacctggccctgctcatctacctgatgcgcatggtgaaggcg
ctgatggacaaccctactctgtatctagagaaatacgtgcacgagttgatcccggctgtg
atgacctgcatcgtgagcagacagctgtgcctgcggccagatgtggacaatcactgggcg
ctccgggactttgccgcccgcctggtggcccagatctgcaagcatttcagcacaaccact
aataacatccagtcccggatcaccaagaccttcaccaagagctgggtggatgagaagacc
ccgtggacaacgcgctacggctccatcgcaggcctggcagagctgggacatgatgtgatt
aagactctgattctgccacggctacagcaggagggggagcggatccgcggggtcctggat
ggccctgtgctgagcaacatcgaccgcataggggctgaccacgtgcagagcctcctcctg
aaacactgtgcccctgttctggcaaagctgcgcccaccgcctgacaatcaggatgcctat
cgggcagaatttgggtccctcgggcccctcctctgctcccacgttgtcaaggcccgggcc
caggctgctctgcaggctcagcaggtcaacaggaccactctgaccatcactcagccccgg
cccacgctgaccctctcacaggccccccagcctggccctcggacccctggcttgctgaag
gtccctggctccattgcgctgcctgtccagacactggtgtctgctcgagctgctgccccg
cctcagccttcccctcccccaaccaagttcattgtcatgtcatcatcctccagtgcctca
tccacccaacaggtcctgtccctcagcacctcggcccctggctcaggctccaccactacc
tctcctgtcaccaccaccgtccccagcgtgcagcccatcgtcaagctggtctccaccgcc
acaagcgcgccccccagcactgccccctctggtcccgggagtgtccagaagtacatcgtg
gtctctcttccccccacaggggagggcaaaggaggccccacctcccatccttctccagcc
cctcccccgacctcagccccctccccgcttggggtcagcgccctatgtggggggaaactg
gaagctggggagagcccccctcccgctccagggactccgaaggctaatggctcacagccc
cccggatgtggctcccctccgcctgcgccttga
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