Phocoena sinus (vaquita): 116740094
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Entry
116740094 CDS
T07759
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C
KO
K03252
translation initiation factor 3 subunit C
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
psiu03012
]
116740094
Translation factors [BR:
psiu03012
]
Eukaryotic type
Initiation factors
eIF-3
116740094
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
Motif
Other DBs
NCBI-GeneID:
116740094
NCBI-ProteinID:
XP_032461205
Ensembl:
ENSPSNG00000009094
UniProt:
A0A8C9BUY5
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Position
15:complement(71580340..71603716)
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AA seq
913 aa
AA seq
DB search
MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL
TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITNYKQNPEQSADEDAEKNEEDSEG
SSDEDEDDEGVSASTFLKKKSEAPSSESRKFLKKMEDEDEDSEDSEDDEDWDTGSTSSDS
DSEEEEGKQTVLASRFLKKAPTTEEDKKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGE
WERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQI
ASENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWQKCLDCINELMDILFANPNIFV
GENILEESENLQNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQVC
TIIERVQRYLEEKGTTDEICRIYLRRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAENE
GEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQH
ADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERNQ
EQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLRV
GERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRSMLV
RKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPTQ
TVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYMR
RGGYRQQQSQTAY
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggttttttaccaccggttcggacagcgagtccgagtcgtccctgtccggggag
gagctcgtcaccaaacctgtcgggggtaactacggcaaacagccattgttgctgagtgag
gatgaagaagataccaagagagttgtcagaagtgccaaggataagaggtttgaggaactg
accaaccttatccggaccatccgtaatgccatgaagattcgggatgtcaccaagtgcctg
gaagagtttgagctcctaggaaaagcatatgggaaggctaagagcattgtggacaaggaa
ggtgtcccccggttctatatccgaatcctggctgacctggaggactatcttaatgagctg
tgggaagataaggaagggaagaagaagatgaacaagaataatgccaaggccctgagcacc
ctgcgccagaagatccgaaaatacaaccgagattttgagtcccatattacaaattacaag
cagaaccctgagcagtctgcagatgaagatgccgagaagaatgaggaggattcagaaggc
tcttcagatgaggatgaggatgatgaaggagtcagtgcttccactttcctaaagaagaaa
tcagaagctccttctagcgagagtcggaagttcctcaaaaagatggaggatgaagatgag
gactcagaagattcagaagatgatgaagattgggacacaggttccacatcttctgattca
gattcagaggaggaagaagggaaacagacagtgctggcgtcgagattccttaaaaaggcc
cccaccacagaggaggacaagaaggcagctgagaagaaacgggaggacaaagccaagaag
aagcacgataggaaatccaagcgcctggatgaggaggaggaagacaatgaaggcggggag
tgggaaagggtccggggtggagtgcccctggttaaggagaagccaaaaatgtttgccaag
ggaactgagatcacccacgctgttgtcatcaagaaactgaatgagatcctacaggcacga
ggcaagaagggaactgatcgtgcagcccagattgagctgctacagctgctggttcagatt
gcttctgaaaacaacctgggagagggtgtcatcgtcaagatcaagttcaatatcatcgcc
tctctttatgactacaaccccaacctggccacatacatgaagcctgagatgtggcagaag
tgtctggactgcatcaatgagctgatggatatcctgtttgcaaaccccaacatctttgtt
ggagagaacattctggaagagagtgagaacctgcaaaacgctgaccagccgctgcgtgtc
cgtggctgtatcctaactctggtggaacgaatggatgaagaatttaccaagataatgcaa
aacactgatcctcactcccaagagtacgtggagcacctgaaggacgaggcacaggtgtgc
accatcattgagcgtgtgcagcgctacctggaggagaagggcaccactgacgagatctgt
cgcatctacttgaggcgcatcctccacacctactacaagtttgattacaaggcccatcag
cggcagcttaccccccctgagggctcctcaaagtcagagcaagaccaggctgaaaatgag
ggcgaggactcagctgtgctcatggagagactgtgcaagtacatctatgccaaggaccgc
acagaccgaatccgcacatgcgccatcctctgccatatctaccatcatgctctgcactcc
cgctggtaccaggcccgtgacctcatgctcatgagccacctacaagacaacattcagcac
gcggacccaccagtacagatcctgtacaaccgcaccatggtgcagctgggcatctgtgcc
ttccgccaaggcctgaccaaggatgctcacaatgccctgctggacatccagtcaagcggc
cgggccaaggagcttctgggccagggcctgctgctgcgcagcctgcaagagcgcaaccag
gagcaggagaaggtggagcggcgccggcaggtgcccttccacctgcacataaatctggag
ctgctggagtgtgtttacctggtgtcggccatgctcctggagatcccctacatggccgcc
catgagagtgacgcccgccgacgcatgatcagcaagcagttccatcaccagctgcgggtg
ggcgagcgacagcccttgctgggtccccccgagtcaatgagggaacacgtggtcgctgcc
tccaaggccatgaagatgggtgactggaagacctgccacagttttatcatcaacgagaag
atgaatggcaaagtgtgggaccttttcccggaggctgacaaagtccgaagcatgctggtt
aggaagatccaggaagagtcactgcggacctacctcttcacctacagcagtgtctatgac
tccatcagcatggagacactgtctgacatgtttgaactggacctgcccactgtgcactcc
atcatcagcaagatgatcattaacgaggagttgatggcctccctggaccagccgacacag
acagtggtgatgcaccgcactgagcccaccgcccagcagaacctggcactgcagctggct
gagaagctgggcagcctggtggaaaacaacgagcgggtgtttgaccacaagcagggtacc
tatggtggctacttccgagaccagaaggatggctaccgcaaaaatgagggctacatgcgc
cggggtggctaccgccagcagcagtctcagacggcctactga
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