Phocoena sinus (vaquita): 116740103 Help Entry 116740103         CDS       T07759                                  Symbol MEFV Name (RefSeq) pyrin isoform X1   KO K12803   pyrin Organism psiu  Phocoena sinus (vaquita) Pathway psiu04621   NOD-like receptor signaling pathway psiu04623   Cytosolic DNA-sensing pathway psiu05135   Yersinia infection Brite KEGG Orthology (KO) [BR:psiu00001]  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     116740103 (MEFV)    04623 Cytosolic DNA-sensing pathway     116740103 (MEFV)  09160 Human Diseases   09171 Infectious disease: bacterial    05135 Yersinia infection     116740103 (MEFV)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:psiu04131]     116740103 (MEFV) Membrane trafficking [BR:psiu04131]  Autophagy   Other autophagy associated proteins    TRIM-directed selective autophagy     116740103 (MEFV) SSDB OrthologParalogGFIT Motif Pfam:  PYRIN zf-B_box CLIP1 Mua Motif Other DBs NCBI-GeneID:  116740103 NCBI-ProteinID:  XP_032461227 LinkDB All DBs Position 15:complement(52294875..52310553) Genome browser AA seq 818 aa AA seqDB search MTYSQPYSQFLPKHRAFPVPFPLFHKLLLSLPLGSRTDSCFSPQKPDSCLQPLLVNAMAK TRSDHLLYSLEELVPYDFEKFKFKLQNTSLEKEHSRIPRGQLQTAKPVKLATLLVTHYGE EDAVRLTLQVLRAINQHLLAEELNSAIGPGCQVKESDTDSSAMSGSSGEIKPKSLKIPDS LEGDKQRQSGDGAGCPPSIQPEAGRGPQKKPLGKQRDQKGSEHPDVQGKPGARNTTLSSK RSPFPSKPQGEKGSNVGVRLRRNASSAGRLQGLSSGSFAGSLGRREFKISEAYLPSGKKR PKSLEFTISSGETEPLNPETLLLQEKMRSENPGSAATLNTGATVAAEKGSRNPEHAITLE GVALRNTLSSVSLAGKKIWEHPESTVPAEKSGTEAPKTSKALEEVVGGVLHDPSNPEVPP SSGRLQDKAVCRLCYAQEGDPVGGSCVRVSCSCSVASRDPEVSRGYSSSCPRCQDLLPGK SHGSLEWQEGLQMASLSPKSLPQCERHMKQVQLLFCEDHGEPICLICRLSQEHRGHHVRP IEEAALEYKKQIQKQLEHLKELRKSGEEQRSQGDKKTANFLKQAETQKQRIQYQLEQLCQ FLEQQEQLFVACLEELGQTIGQVRETYGTRVTGDIALLDKLIGELEAKQCQPEWELMKDV RVTLHRAKKVTVPELWATPPEVKEKIHLLYQKSEFVEKRMRHFLETLRSEMEMFNGESGG GSMCWPGITAIFPCAVDFWELFRKEKTPVTKVEANMTSAHRLCARVTDCQLTRVQSIQGR PGYQRGMGLYPSRGSRVLSRERESLSFLVVGTRVDLAL NT seq 2457 nt NT seq  +upstreamnt  +downstreamnt atgacatactcacagccttactctcagttcctaccaaaacacagagcatttcctgtgcct tttccgttatttcacaagctgcttcttagtcttcctctgggctccaggacagacagctgc ttctcccctcagaagccagacagttgcctccagcctctcctggtcaacgccatggccaag acccgtagtgaccatctgctgtactccctggaagagctggtgccctatgactttgagaag ttcaagttcaagctgcagaacaccagcctggagaaggagcactcccggattccccggggc caactccagacagccaagccagtgaagctggccactctgctggtcacccactatggggag gaggacgccgtgcggctgactctgcaggtcctgagggccatcaaccagcaccttctggca gaggagctcaacagtgcaatcggcccagggtgtcaggtaaaagaaagtgacacagacagt tcagcaatgtctggttcctctggggagattaagcccaagagtctgaagataccagatagc ctggaaggtgacaagcagcgacaaagtggtgatggggctggctgcccaccatccatccag ccggaggctggaagggggccccagaagaagcctctgggcaaacagagagatcagaaaggc tctgagcacccggatgtgcagggcaagccaggggccaggaacacaactctgtcttccaag agaagcccctttcccagcaagccacagggggagaaggggagcaatgtgggggtcaggctg cgcaggaatgccagctctgcaggaaggctccaaggactctccagtgggtcgtttgctggg tccctgggaaggagagaatttaagatatctgaagcatatttaccttcaggaaagaagcga cccaaaagtcttgaatttaccatttcttcaggagagacagaacctctcaacccagaaact cttctgcttcaagagaaaatgagaagtgagaatccaggctcagcagccactctgaacaca ggggctactgtggctgcagagaaaggatccaggaatccagaacatgccataactctggag ggggtagcactcaggaatacactttccagtgtatcattggctggaaagaagatctgggag catccagagtccacagtacctgcagagaagagtggaactgaggctccaaagacctctaag gccttggaggaggtggtaggtggtgtgctccatgatccttcaaatccagaagtccctcca tcttcagggagactgcaggacaaggctgtgtgtcgcctttgctatgcccaggaaggagac ccggttggtggcagctgcgtgcgtgtttcctgcagctgctccgttgcttctagggatcct gaggtctcacgtggctactcatccagctgccctcggtgccaagacttactcccggggaag agccatggaagcctcgagtggcaggagggcctgcagatggccagcctgagccccaagtcc ctgccacagtgtgagcgtcacatgaagcaggtccagctgctcttctgcgaggaccacggg gaacccatctgcctcatctgcaggctgagtcaggagcaccgaggccaccatgttcgcccc atcgaggaggccgccctggaatacaagaaacaaattcagaagcagctggagcatctgaag gagttgagaaaatctggagaggagcagagatctcagggggataagaagacagcaaacttc ctgaaacaagctgaaacccagaagcagagaatccagtaccagttggagcagttatgccag tttttagagcagcaagagcagctctttgtggcctgtctggaggagctgggccagaccatt ggccaagtcagggagacatatggcacccgggtgacaggggacatcgcccttctcgacaag ctgattggggagctggaggccaagcagtgccagccagaatgggagcttatgaaggacgtc agagtcaccctgcacagggccaagaaggtgactgtccctgagctgtgggccacccctcca gaggtgaaagaaaagatccacctgctctaccagaaatcagagtttgtggagaagcgcatg aggcacttcttggaaaccctgcgttcagaaatggaaatgttcaacggtgagtccggtggt ggtagtatgtgttggccagggattactgcaattttcccttgtgctgttgatttctgggaa ttatttagaaaagagaaaacacctgtaacaaaggtggaagcaaacatgacaagtgctcac aggctctgtgccagggtcactgactgtcaactcaccagagtacagagtatccaaggcagg cctgggtaccagagaggaatggggttatatccaagcagaggaagccgagtcctgagcagg gagagggagtcactgtctttccttgttgtggggaccagggtagatttagccctctga

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