Phocoena sinus (vaquita): 116740168
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Entry
116740168 CDS
T07759
Symbol
ITGAM
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-M
KO
K06461
integrin alpha M
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04015
Rap1 signaling pathway
psiu04145
Phagosome
psiu04514
Cell adhesion molecule (CAM) interaction
psiu04517
IgSF CAM signaling
psiu04610
Complement and coagulation cascades
psiu04613
Neutrophil extracellular trap formation
psiu04640
Hematopoietic cell lineage
psiu04670
Leukocyte transendothelial migration
psiu04810
Regulation of actin cytoskeleton
psiu05133
Pertussis
psiu05134
Legionellosis
psiu05140
Leishmaniasis
psiu05146
Amoebiasis
psiu05150
Staphylococcus aureus infection
psiu05152
Tuberculosis
psiu05202
Transcriptional misregulation in cancer
psiu05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
116740168 (ITGAM)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116740168 (ITGAM)
04517 IgSF CAM signaling
116740168 (ITGAM)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116740168 (ITGAM)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116740168 (ITGAM)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
116740168 (ITGAM)
04610 Complement and coagulation cascades
116740168 (ITGAM)
04613 Neutrophil extracellular trap formation
116740168 (ITGAM)
04670 Leukocyte transendothelial migration
116740168 (ITGAM)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116740168 (ITGAM)
09162 Cancer: specific types
05221 Acute myeloid leukemia
116740168 (ITGAM)
09171 Infectious disease: bacterial
05133 Pertussis
116740168 (ITGAM)
05134 Legionellosis
116740168 (ITGAM)
05150 Staphylococcus aureus infection
116740168 (ITGAM)
05152 Tuberculosis
116740168 (ITGAM)
09174 Infectious disease: parasitic
05146 Amoebiasis
116740168 (ITGAM)
05140 Leishmaniasis
116740168 (ITGAM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116740168 (ITGAM)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116740168 (ITGAM)
04515 Cell adhesion molecules [BR:
psiu04515
]
116740168 (ITGAM)
04090 CD molecules [BR:
psiu04090
]
116740168 (ITGAM)
00536 Glycosaminoglycan binding proteins [BR:
psiu00536
]
116740168 (ITGAM)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116740168 (ITGAM)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116740168 (ITGAM)
Cell adhesion molecules [BR:
psiu04515
]
Integrins
Integrin alpha subunits
116740168 (ITGAM)
CD molecules [BR:
psiu04090
]
Proteins
116740168 (ITGAM)
Glycosaminoglycan binding proteins [BR:
psiu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116740168 (ITGAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ITGAX-like_Ig_3
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_alpha
Integrin_A_Ig_3
TMEM18
Motif
Other DBs
NCBI-GeneID:
116740168
NCBI-ProteinID:
XP_032461396
Ensembl:
ENSPSNG00000011950
LinkDB
All DBs
Position
15:72786726..72824208
Genome browser
AA seq
1151 aa
AA seq
DB search
MTHRVLLLTALALCHGFNLDTEKAVIFQNNARGFGQSVVQLEGSRLVVGAPQEIKASNQT
GGLYQCDYSMGKCEPIPLQVPPEAVNMSLGLSLAFATKPFQLLACGPTGHRICKDNTYAI
GFCFLFQSSLLQQPSRLPEALRGCPQKESDIAFLIDGSGSINPTDFQRMKNFVSTVMSQF
QKSKTLFSLMQYSEEFQTHFTFNDFKRNPSPESLVRPITQLLGRTHTATAIRKVVRELFH
SRNGARENALKMLVVITDGEKFGDPLDYKDVIPEADRKGVIRYVIGVGDAFFSDKSLKEL
DTIASKPRGDHVFQVNNFEALKTIQNQLQEKIFAIEGTHTGSTSSFEHEMSQEGISAVFT
SDGPLLGAVGSFDWAGGAFLHTPQDKVTFINTTRVDSDMNDAYLGYAAEVILRNRVQSLL
LGAPRYQHIGLVVIFKKDAGAWEKNAEIKGSQIGSYFGASLSSVDVDRDGSSDLVLIGAP
HYYEQSRGGQVSVCPFPRGRAKWQCGAVLRGEKGHLWARFGAALTVLGDVNGDRLSDVAI
GAPGEQENQGAVYLFHGTSGLGISPAHSQRITGSQFSPRLQYFGQSLSGGRDLTVDGLXD
LAVGAQGYVLLLRXDQVLKVEVTMDFHPGTVARDVYECRERVVKGKIAGXVRVCLHVRKN
TRDRLREGDTQSTITYDLALDPGRPHSQAIFDETKNNTLRHIVTLGLSQKCETLKLRLLD
CVEDSVTPIALRLNFSLVGKPSSYFGNLRPVLDVEAPTLFTASFPFEKNCGNDSICQDDL
SITFSFMSLDTLVVGGSRDLNVTLTVRNQGEDSYRTQVTFFYPSGLSYRRVSGAQNQRSQ
RSWRLICESDVSTEGSGTLKSTSCSINHPIFPDNSEITFNITFDMNPDAFFGNKLLLKAN
VTSENNIPGNNKTEFQLQLPVKYAVYVVVTSLEVSTKYLNFTASEKTRHIIEHQYQFNNL
GGRKLPISVVFLVPIQLNQVTVWDQLQVTFSQNLSSRCHTNKIDPRRSDFLGELKKAPLL
NCSIAVCQRIQCDIPSFGVQEEFKVTLKGNLSFDWYIKTLHNHLQVVSTAEILFDDSEFA
LLPGQGAFVRAQTETKVEPYEVHNPVPLIVGSSAGGLLLLALITGGLYKLGFFKRQYKDM
ITEAGPETAPM
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgactcacagagtccttctactaacagccttggccttatgtcacgggttcaacctggac
acggaaaaagcagtcatcttccaaaacaatgcaaggggcttcgggcagagcgtggtccag
cttgagggatcccggctggtggttggagccccccaggagataaaggcttccaatcaaacg
ggcggcctctaccagtgtgactacagcatgggcaagtgtgaacccatccccctgcaggta
cccccggaggctgtgaacatgtccctgggcctgtctctggcgttcgccaccaaacctttc
cagttgctggcctgtggccccactgggcaccgaatctgcaaggacaacacctatgcgatc
ggcttctgcttcctgtttcaatccagcctactgcagcaacccagcaggctcccagaggcc
ctcagagggtgccctcagaaagagagtgacattgcttttttgattgatggctctggtagc
atcaacccgacagactttcagcggatgaagaactttgtctcaactgtgatgagtcaattc
caaaagtccaaaaccttgttctctttgatgcagtactctgaagaatttcagactcatttc
accttcaacgatttcaagagaaacccttccccggaatcgctggtgaggccaataacacag
ctgttggggaggacacacacggccacagcgatccgcaaagttgtaagagaactgtttcac
agcagaaacggagcccgggagaatgcccttaagatgctggttgtcatcacagatggagaa
aagtttggcgatcctttggactacaaggatgtcatccctgaagcggatagaaagggggtc
attcgctacgtcattggggtgggagatgccttcttcagtgacaaatctctaaaagagctc
gataccatcgcatccaagccgcgtggtgatcacgtgttccaagtgaataactttgaagct
ctgaagaccattcagaaccagcttcaggaaaagatctttgcgattgagggtacgcacaca
ggaagtaccagctcctttgagcatgagatgtctcaggaaggcatcagtgctgtcttcacc
tccgatggtcccttgttgggtgctgtggggagctttgactgggctggtggagcctttctg
catacgccacaggataaagtcaccttcatcaacacaaccagggtagattcagacatgaat
gatgcttacctgggttatgctgctgaagtcatcttgcggaaccgggtgcaaagcctgctt
ctgggggcgcctcgatatcagcacatcggcctggtggtgatattcaaaaaggacgcaggt
gcttgggagaaaaacgctgaaatcaagggtagccagatcggctcctacttcggggcctcc
ctcagctccgtggacgtggacagagatggcagctccgacctggtcctcatcggggccccc
cattactatgagcagagccggggcgggcaggtgtccgtgtgcccctttccccgggggagg
gctaagtggcagtgtggtgctgtcctgcgaggggagaaaggccacctctgggcccgcttt
ggggcagctctgacggtgctgggggatgtgaacggggacaggctgtcggacgtggccatc
ggggccccaggagagcaggagaaccagggtgctgtctacctgtttcacggaacctcggga
ctggggatcagccccgcccacagccagcggatcacaggctcccagttctctccgaggctc
cagtattttgggcagtcactgagcgggggccgggacctcacagtggatggactgngtgac
ctggctgtgggggctcaggggtacgtgctgctgctcaggtgagaccaggtgctgaaagtt
gaggtgaccatggattttcacccagggacagtggcaagggatgtgtatgagtgtcgtgag
cgggtggtgaaaggaaagatcgctgggnaggtcagagtctgcctccatgtccgcaagaac
acacgggacaggctgagagaaggagatacccagagcaccatcacatatgacctggctctg
gacccaggtcgcccacattcccaggccatctttgatgagactaagaacaacactctcaga
catatagtgacgttggggctgagtcagaaatgtgagaccctgaagctccggttactggat
tgtgtagaggactcagtgacccccattgccttgcgcctcaacttctctctggtggggaag
ccctcgtcctattttgggaacctccggccagtgctggatgtagaagctccaacactcttc
acagcctcgtttccctttgagaagaattgtggcaatgacagcatttgccaggatgacctc
agcatcaccttcagttttatgagcctggacaccctggtggtaggtggttctcgggactta
aacgtgacgctgactgtgagaaaccagggcgaggactcctacagaacacaggtcaccttc
ttctacccatctggcttgtcctatcggagggtgtcaggagcccagaaccagcgctcacag
cggtcctggcgcctgatctgtgagtctgacgtctccactgaagggtctgggaccttgaag
agcaccagctgcagcataaaccaccccatcttcccagacaactcggagatcaccttcaat
atcacatttgacatgaaccccgatgctttctttggaaacaaactacttctcaaggccaac
gtgaccagtgagaacaacatacctgggaacaacaaaaccgaattccagctgcagctgcct
gtgaaatacgctgtctatgtggtggtcaccagccttgaggtctcgaccaaatatctcaac
ttcacagcctcagagaagacccgccacattatagagcatcagtatcagttcaacaacctg
ggcgggaggaagctccccatcagcgtggtcttcttggtccccatccagctgaaccaggtg
accgtgtgggaccagctccaagtcaccttctcccagaacctctccagtagatgccacacc
aacaagattgaccctcgtcgctctgacttcctgggggagcttaagaaggctccactgctg
aactgctccatcgctgtctgccagagaatccagtgtgacatcccgtcctttggtgtccag
gaagaattcaaggtcaccctcaagggcaacctctcatttgactggtacatcaagactttg
cataaccatcttcaggttgtgagcacggcggagatcttgtttgatgattcggagtttgcc
ctgctcccaggacagggcgcgtttgtgagggcccagacagagaccaaggtggagccttac
gaagtacataaccctgtcccgttgatcgtgggcagctcggctggggggctgttactcctg
gccctcatcacgggtggcctgtacaagcttggcttcttcaaacgacagtacaaggacatg
ataactgaagctggccctgaaaccgctcccatgtag
DBGET
integrated database retrieval system
