Phocoena sinus (vaquita): 116740172
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Entry
116740172 CDS
T07759
Symbol
XYLT1
Name
(RefSeq) LOW QUALITY PROTEIN: xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
psiu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
psiu01100
Metabolic pathways
Module
psiu_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116740172 (XYLT1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
116740172 (XYLT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116740172 (XYLT1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
116740172 (XYLT1)
Glycosyltransferases [BR:
psiu01003
]
O-Glycan biosynthesis
Glycosaminoglycan
116740172 (XYLT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
116740172
NCBI-ProteinID:
XP_032461402
Ensembl:
ENSPSNG00000007145
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All DBs
Position
15:63688989..64000712
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AA seq
954 aa
AA seq
DB search
MVAAPCARRLARRSHSALLAALTVLLLQTLVVWNFSSLDSGAGERRGGAAVGGAEQPPPA
SRRERRDLPAEPAAARGGGGGGGGGRGPPARARGGGPGAPRAQQPASRGALAARALAAQP
SPVITLEAQDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRTQKQKHQPELTKKP
PRGQKELLKRKLGQEEKGKGHLSPGKGANEVLPPGARAPVNGSRGKDVPRQPHARKSGGS
SPEIKSDRPLKCDISGKEAISALSRSKSKHCRQEIGETYCRHKLGLLMPEKVTRFCPLEG
KANKNIQWDEDSVEYMLANRVRIAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSN
YLHRQVLQFTRQYSNVRVTPWRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAA
DYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRIPE
GIAVDGGSDWFLLNRKFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHCDTM
VDNNLRLTNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFEAVVN
QEIIGQLDYYLYGNYPAGTPGLRAYWENVYDEPDGIHSLNDVTLTLYHSFSRLGLRRAEL
LLHDAGENSCRYYPMGHPASVHLYFLADRFQGFLIKHHATNLAVSKLETLETWVMPKKXF
KIASPPSDFGRLQFSEVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTVTVVWV
DPVNIIAATYDILIESTAEFTHYKPPLNLPLRPGVWTVKILHHWVPVAETKFLVAPLTFS
NRQPIKPEEALRLHNGPLRSAYMEQSFQSLNPVLSLPINPAQVELARRNAASSGAALERW
LDSLVGGMWTAMDICATGPTVCPVMQTCSQTAWSSFSPDPKSELGAVKPDGRLR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcgccgtgcgctcggaggctggcccggcgctcgcactcggcgctgctcgcg
gcgctcaccgtgctgctgctgcagacgctggtcgtgtggaatttcagcagcctcgactcc
ggggccggggaacgccgcgggggtgcagcggtcggtggcgcggagcagccgcccccggcc
tcgcgccgcgagcgccgggacctgcccgccgagccggctgcagcccgaggaggaggcggc
ggaggcggaggaggacgggggccgccggcgcgggcgcgaggaggcggccccggagcaccc
cgcgcgcagcagccggccagccgaggggcactggccgcgcgggcgctggccgcacaacca
agccctgtgatcaccctggaggcccaggatggctacttctctcaccggccaaaagagaaa
gtgcgaacagacagcaacaatgagaactctgtacccaaggattttgagaacgtggacaac
agcaacttcgcacccaggactcaaaagcaaaagcaccagcccgagttgacgaagaagccc
ccgagaggacagaaggagcttctgaagaggaagctggggcaggaggagaaggggaagggg
catctgtccccagggaaaggtgccaacgaggtgctgcctcctggtgcgagagccccggtc
aacggcagccgagggaaggatgtccccagacagccccacgcccggaagagtgggggcagc
tcccccgagatcaagtctgaccggcccctcaagtgtgacatctcgggtaaggaggccatc
tccgccctgtcccgctccaagtccaagcactgccgccaggagatcggggagacctactgc
cgccacaagcttggactactgatgcccgagaaggtcactcggttctgccccctcgaaggc
aaagccaacaagaacattcagtgggatgaggattcggtggagtatatgctggccaaccgg
gtcagaatcgcctttgtcctggtggtccacggccgcgcctctcggcagctacagcgcatg
ttcaaggccatctaccacaaagaccacttctactacatccacgtggacaagcgctctaat
tacctgcatcgccaagtgctccagttcaccaggcagtacagcaacgtccgcgtcaccccc
tggaggatggccaccatctgggggggagccagcctgctgtccacgtacctgcagagcatg
cgggacctcctggagatgaccgactggccctgggacttcttcatcaacctcagcgcagct
gactaccccatcaggacaaatgaccagctggtggcatttctctcccgataccgagatatg
aatttcttgaagtcacatggccgggacaatgccaggttcatccggaaacagggcctggac
cggctctttctggagtgtgatgcccacatgtggcgcctgggggaccggcggatcccagag
ggcattgccgtggatggcggctcagattggttcctgctaaaccggaagtttgttgagtat
gtgacgttctccacagacgatctggtgaccaaaatgaagcaattctactcctacaccctg
cttcctgcagagtccttcttccacacggtcctggagaacagtccccactgcgacaccatg
gtggacaacaacctgcgcctcaccaactggaaccgcaagctgggctgcaagtgccagtac
aagcacatcgtggactggtgcggctgctcccccaacgacttcaagccgcaggactttcac
cgcttccagcagacagcccggcccaccttctttgctcgcaagttcgaagctgtggtgaat
caggaaatcattgggcagctggactattacctgtatgggaactaccccgcgggcaccccg
ggcctccgcgcgtactgggagaatgtctacgatgagcctgacggcatccacagcctgaac
gacgtgacgctgaccttgtatcattccttctcccgcctgggcctccgccgggcagagctg
ttgctgcacgacgccggggagaacagctgcaggtactatccaatgggccacccagcctct
gtccacctctacttccttgctgaccgtttccagggctttctgatcaagcatcacgctacc
aatctggccgtgagcaaactcgagaccctggagacatgggtgatgccaaagaagntcttc
aagatcgccagcccacccagcgactttgggaggcttcagttttctgaggtcggcactgac
tgggatgccaaggagcggctctttcgcaactttgggggtctcctggggcccatggatgag
ccagtaggcatgcagaaatgggggaagggccccaacgtgactgtgactgtcgtctgggtg
gatcctgtcaacatcatcgcagccacctatgacatcctgattgagtccactgccgaattc
acccactacaagccccctttgaacttgcccctgaggcctggggtctggacagtgaaaatt
ctccaccactgggtgccagtcgcagaaaccaaattcctcgtcgcgcctctgaccttctca
aacaggcagcccatcaaaccggaggaggcattgaggctgcacaacgggcccctccgcagc
gcctacatggagcagagcttccagagcctgaaccccgtcctcagcctgcccatcaacccc
gcccaggtggagctggctcggaggaatgccgcgtccagcggcgccgcactggagcgctgg
ctggactcgctggtgggcgggatgtggaccgccatggacatctgtgccacaggccccacc
gtctgcccagtcatgcagacctgcagccagacggcctggagctccttcagccctgacccc
aagtcagagctgggcgcagtcaaacccgacggccggctcaggtag
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