Phocoena sinus (vaquita): 116740174
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Entry
116740174 CDS
T07759
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116740174 (DHX35)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116740174 (DHX35)
Spliceosome [BR:
psiu03041
]
Complex C
Other components
Complex C specific factors
116740174 (DHX35)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
Cas3-like_C_2
AAA_19
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
116740174
NCBI-ProteinID:
XP_032461414
Ensembl:
ENSPSNG00000004869
UniProt:
A0A8C9DYR0
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Position
15:complement(20809926..20880788)
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AA seq
703 aa
AA seq
DB search
MAAPVGPVKFWRPGTEGPGVSISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLR
NHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRV
AEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHE
RTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFWDFFNQNDTSDPTRDTCVILTVEG
RTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARA
LGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRTVRKVIVATNVAETSITISGIVYVIDC
GFVKLRAYNPRTAIECLVVVPVSQASASQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVP
EMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRVHRKFAV
EEGDHLTMLNVYEAFIKHSKNSQWCQEHFLNYKGLVRAVTVREQLKKLLVKFQVPKKSSE
GDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQ
TSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKVQDQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgtgggaccggtgaagttctggagacctggtacagagggaccaggtgtc
agcatctctgaagagagacaaagtctagctgaaaactctgcaacgactgttgtttacaat
ccttatgctgccctttctatagagcagcagaggcagaagctgccggtgttcaagcttagg
aatcatatactgtacttgatagaaaactatcaaacagtggtgattgttggagaaacagga
tgtgggaaaagcacgcagattccacaatacctcgcagaagctggctggacagccgaagga
agagtggtgggagtgacccagccccgaagagtggctgctgttacagttgcagggagagtg
gctgaggaaaggggtgcggtgctgggccacgaggtgggctactgcatccgctttgatgac
tgcaccaacccactggctacaagaattaagtttctgaccgatggaatgctggtcagggaa
atgatggttgatccattgttaacaaaatacagtgccatcatgctggatgaagcccacgag
aggaccttgtacaccgacattgccattggcctgctgaaaaagattcagaaaaagcgaggg
gatcttcgattgattgtggcttcagccaccttggatgcagagaaattttgggatttcttt
aatcaaaatgacaccagtgacccaaccagggatacgtgcgtgatccttacagtggaaggg
cgaacatttccagtggatatcttttatctacaaagtcctgttccagattatatcaaatca
actgtagaaactgtgatgaaaattcaccagacagagggagatggagacatattagcattt
ctcactggccaggaagaggtagaaactgttgtgtctatgctgattgagcaggctcgagct
ctgggtcggactgggatgaagagacacctccgggttctccccatgtatgcgggactgcct
tcctttgagcaaatgaaagtgtttgaaagggtgtcacgcactgtcagaaaggtgatagtg
gccaccaatgtagcagaaacctccatcacaatcagcgggattgtgtatgtgattgactgt
ggctttgtgaaactccgagcctacaaccccaggacagctattgagtgcttggtggtggtc
cccgtgtcccaggcatcagccagccagcgagcaggacgtggtggccgcagccgctcagga
aaatgttaccgcctttatacagaggaagcctttgaccagctgcctcaatccaccgttcct
gagatgcagcggagcaatctggcccctgtcatcctgcagctgaaagcgctggggatcgac
aacgtcctcaggttccacttcatgtcgccccctccagcacagtcgatggttcaggcgttg
gagttactctatgctctgggagggctggacaaagactgtcgcctaactgagccgcttggc
atgaggatagcagagtttcctttgaatcccatgtttgcaaaaatgctgcttgaatcagga
aattttggctgttctcaggaaattctaagcattgccgccatgatgcagatccagaatgtc
tttgtggtcccctcaaaccagaagtctcaggctattcgagtgcaccgaaaatttgctgtg
gaagagggtgatcatcttaccatgctcaatgtgtatgaagcattcatcaagcacagtaag
aactcccagtggtgtcaggagcatttcctgaattacaagggcctcgtcagagccgtgacg
gtgagggagcaattgaaaaagcttcttgtcaagtttcaagtccccaagaaatccagcgaa
ggtgatccagatccggttctgaggtgcattgtttccggattctttgcaaatgctgcgagg
tttcattctactggagcttataggaccatccgtgacgatcatgaattgcacatccaccct
gcatcggtcctctatgcagagaagccgccccgctgggttatctacaatgaagttatccag
acctccaagtattacatgagagatgtgaccgccattgaatctgcttggttattggagctg
gctcctcacttttatcaacaagggacgcacctgtccctaaaagccaagagggccaaggtc
caggaccagtga
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