Phocoena sinus (vaquita): 116740176
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Entry
116740176 CDS
T07759
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116740176 (VPS35L)
Membrane trafficking [BR:
psiu04131
]
Protein recycling
Others
Retriever complex
116740176 (VPS35L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4698
Motif
Other DBs
NCBI-GeneID:
116740176
NCBI-ProteinID:
XP_032461418
Ensembl:
ENSPSNG00000008547
UniProt:
A0A8C9E168
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Position
15:64965574..65100480
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AA seq
963 aa
AA seq
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MAVFPWHSRNRNYKAEFASCRLEAVPLEFGDYHPLKPITVTESKTKKVSRKGSTSSTSSS
SSSSVVDPLSSVLDGTDPLSMFAASADPASLVATTDNSRKKRDRDDNSIVGSDFEPWASK
RGEILARYTTTEKLSINLFMGSEKGKAGTAISAMSEKVRTRLEELDDFEEGSQKELLNLT
QQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDT
FGKLVYERIFSMCMDNHSILPDHFSPENVNDTAKETCLNWFFKIASIRELIPRFYVEASI
LKCNKFLSKTGISECLPRLTCMVRGIGDPLVSVYARAYLCRVGMEVAPHLKESLNKNFFD
FLLTFKQIHSDTVQNQLVLQGVELPSYLPLYSPAMDWIFQCISYHAPEALLTEMMERCKK
LANNALLLNSVMSAFRAEFIATRSMDFIGMIKECDESGFPKHLLFRSLGLNLALANPPES
DRLQILNEAWKVITKLKNPQDYVNCAEVWVEYTCKHFTKREVNTVLADVIKHMTPDRAFE
DSYPQLQSIIKKVIAHFHDFSVLFSVEKFLPFLDMFQKESVRVEVCKCIMEVFIKHQQEP
TKDPVILNALLHICKTMHDSVNALTLEDEKRMLAYLINGFIKMVSFGRDFEQQLSFYVEA
RSMFSNLEPVLVQLIHSVNRLAMETRKVMKGNHSRKTAAFVRACVAYCFITIPSLVGIFT
RLNLYLHSGQVALANQCLSQADAFFKAAISLVPEVPKMINIDGKLRPSESFLLEFLCNFF
STLLIVPDHPEHGVLFLVRELLNVIQDYTWEDNSDEKIRIYTCVLHLLSAMSQETYLYHV
DKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEALKRQSSLGLSFFNSILA
HGDLRSNRLNQLSVNLWHLAQRHGCADTRTMVKTLEYIKKRSKHPDMGHLTDLALRLPLQ
TRT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctttccttggcattccaggaacaggaactacaaggctgagtttgcatcatgc
cggttggaggctgtaccactggaatttggggactatcacccactgaaacccataactgtc
acagagtcaaagacaaagaaagtgagccggaaaggaagcacttcttccacgtcctcttca
tcctccagctccgtggtggacccactgagcagcgtcctggatgggaccgaccccctctcc
atgtttgcggcctctgctgaccctgcatccctggtggctaccacggacaactccagaaag
aaacgtgacagagatgataactccattgtaggatcagattttgagccttgggccagcaaa
cgaggagaaatccttgcccggtatactaccacggaaaagctctctatcaatctttttatg
ggatctgaaaaaggcaaagctgggactgccatatccgcaatgtcggagaaggttcggacc
aggctggaggagctggatgattttgaggagggatcccagaaggagctgctgaatttgact
cagcaggattacgtgaaccgcatagaagagctcaaccagtcgctgaaggacgcctgggcc
tcggaccagaaagtgaaggctctaaaaatagtcatccagtgttcaaagcttctttcggac
acaagtgttattcagttctacccaagcaaatttgtccttatcaccgacatacttgataca
tttggaaagctggtatacgagcgcatcttttccatgtgtatggataaccacagcatctta
ccagatcacttctctccagagaatgtaaatgacacagccaaagaaacatgcttaaattgg
tttttcaagattgcttccatcagggaactcattccgagattctatgtggaagcatccatc
ctgaagtgtaacaagttcctctccaaaacggggatttcagagtgtctgccccggctgact
tgtatggtccgagggatcggggaccctctggtgtcggtgtacgccagggcctacctgtgc
agggtgggcatggaagtggctccgcatctcaaagaaagcctaaataagaacttctttgac
ttcctcctcacattcaaacagattcacagcgatactgtccagaaccagctggtgctccag
ggagtggagcttccatcctacctccccttgtactcgcctgccatggactggatcttccag
tgcatttcctaccacgcccccgaggctctgctaacggaaatgatggagagatgtaagaaa
ctagcaaacaatgccttgctgttgaattccgtaatgtcagctttccgggccgagttcatc
gccacaaggtccatggatttcatcggcatgattaaagagtgcgatgagtctggtttcccc
aagcatcttctctttcgctcactgggcttaaacttggccttggctaatcctcctgagagt
gatcgacttcagattctcaatgaagcttggaaagttatcactaaattgaagaatccacag
gactacgttaattgtgccgaagtgtgggtagagtacacctgcaaacatttcacgaaacga
gaggtgaatactgttttggccgatgtcatcaagcacatgactccagatcgtgcatttgaa
gactcctaccctcagcttcagtcaataattaagaaagtaattgcacacttccatgatttc
tcagttcttttttcagtggaaaaatttctgccatttctggacatgttccaaaaagagagt
gtgcgggtggaggtttgcaaatgcatcatggaagtttttatcaagcatcagcaagagccc
actaaggaccccgtcattctgaacgcccttttgcacatttgcaagaccatgcatgactct
gtgaatgcactcactcttgaggatgagaaaagaatgctggcatatttgattaatggattt
ataaaaatggtgtcttttggccgtgattttgaacaacagctgagtttttacgttgaggcc
aggtcgatgtttagcaatctggaacctgttcttgtgcagttgattcatagtgtgaaccgg
ttggcaatggaaacaagaaaagtaatgaaaggaaatcattccagaaagacggctgcattt
gtccgggcctgcgttgcctactgcttcattaccattccctccctggtgggaatcttcacc
cgcctcaatctctacctgcattctggtcaggtggccttggccaaccagtgcctctcccaa
gctgatgcctttttcaaagccgctataagcctcgttccagaagttccaaagatgattaat
attgacggaaagttgcggccctcagaatcgttccttctggaattcctctgcaatttcttt
tctactttattaatagttccggatcatccggaacacggggttctgtttcttgttcgagag
ctgctcaacgtgatccaggactacacctgggaggacaacagtgatgagaaaatccgcatc
tacacctgtgtcctgcacctgctgtccgccatgagccaggagacctatctctaccacgta
gacaaagttgactccaatgacagcctctacgggggagactccaagtttctggctgagaac
aacaagctgtgcgagacggtgatggctcagatcctggagcatctgaaaaccctggccaag
gacgaggccctaaagcgccagagctcgttgggcctttccttctttaacagcatcttggcc
catggggacctgcgcagtaacaggctcaaccagctgtccgtcaacctgtggcacctggca
cagaggcacggctgtgcggacaccaggaccatggtgaaaactctggaatacatcaagaag
cgaagcaaacacccagacatggggcatctgaccgatctggccctcaggctccctctgcag
acgaggacctga
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