KEGG   Phocoena sinus (vaquita): 116740182
Entry
116740182         CDS       T07759                                 
Name
(RefSeq) charged multivesicular body protein 4b-like
  KO
K12194  charged multivesicular body protein 4A/B
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03250  Viral life cycle - HIV-1
psiu04144  Endocytosis
psiu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116740182
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116740182
  09143 Cell growth and death
   04217 Necroptosis
    116740182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psiu04131]
    116740182
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116740182
Membrane trafficking [BR:psiu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    116740182
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116740182
  Exosomal proteins of other body fluids (saliva and urine)
   116740182
  Exosomal proteins of colorectal cancer cells
   116740182
SSDB
Motif
Pfam: Snf7 SYF2 Phage_TAC_15 CCDC93_N
Other DBs
NCBI-GeneID: 116740182
NCBI-ProteinID: XP_032461430
LinkDB
Position
15:64966033..64969946
AA seq 219 aa
MSLVIKKSLEGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIKQELTAAKKHGTKNKRAA
LQALKRKKRYEKQLAQINGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDI
DKVDELMQNIADQQELAEEISTAISKPVGFGEEFDEDELMAELEELEQEELGKNLLEISG
PETFPLPNVPSISVPSKPTKKKEEEDDDMKELGTWAGSI
NT seq 660 nt   +upstreamnt  +downstreamnt
atgtcattagtaattaaaaagtcacttgagggcaagggcggcccgaccccccaggaggcc
atccagaggcttcgggacacggaggagatgctaagtaagaaacaggaattcctggagaag
aagatcaagcaggagttgacagccgccaagaagcatggcaccaaaaacaagcgcgctgcc
ctccaggcactgaagcgcaagaagaggtatgaaaagcagctggcacagatcaacggcaca
ctgtcaaccatcgagttccagcgagaggccctggagaatgctaacaccaacaccgaggtg
ctcaagaacatgggctatgccgccaaagccatgaaggctgcccatgacaacatggacatc
gataaagttgatgagttaatgcagaacattgctgatcagcaggaacttgcagaagagatt
tcaacagctatttcaaaacctgtagggtttggagaagagtttgacgaggatgagctcatg
gcagaattagaagaactagaacaggaggaactaggcaagaatttgctggaaatcagtgga
ccggaaacattccctctaccaaatgttccttctatatccgtaccatcaaaacccaccaag
aagaaggaagaggaagacgacgacatgaaggaattggggacctgggctggatccatttaa

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