Phocoena sinus (vaquita): 116740188
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Entry
116740188 CDS
T07759
Symbol
JMJD8
Name
(RefSeq) jmjC domain-containing protein 8 isoform X1
KO
K25792
jumonji domain-containing protein 8
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116740188 (JMJD8)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
116740188 (JMJD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_8
JmjC_2
JmjC
Cupin_2
Cupin_1
Motif
Other DBs
NCBI-GeneID:
116740188
NCBI-ProteinID:
XP_032461438
Ensembl:
ENSPSNG00000009121
UniProt:
A0A8C9BQ49
LinkDB
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Position
15:complement(50104360..50107187)
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AA seq
269 aa
AA seq
DB search
MALGVRLLLLLALWALVVPARSLREAGDGGWWRPGPGAPAAVAEEECCTVERRANLSYAE
FVQHYAFSRPVILQGLTDNSRFRDLCSRQRLLALFGDSVVRLSTANTYSYQKVDLPFQEY
VEQMLHPQDPFSMGNDTLYFFGDNNFTEWASLFRHYSPPPFNLLGTIPAYSFGIAGAGSG
VPFHWHGPGFSEVIYGRKRWFLYPPAKTPEFHPNKTTLAWLRDTYPALALSARPLECTIH
AGEVLYFPDRWWHATLNLETSVFISTFLS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgggggtgcggctactcctgttgctcgcgctctgggcgctggtggttccggcc
cggagcctccgggaggcaggcgacggagggtggtggcggcccgggccgggggcgccggcg
gccgtggcggaggaggaatgctgcaccgtagagcgccgggccaatctcagctacgccgag
ttcgtgcagcactacgccttttccagacctgtcattctgcaggggctcacagacaactcg
aggttccgggacctgtgctcccgtcaaaggctgctggccttgtttggggacagcgtggtc
cggttgagcactgccaacacctactcctaccagaaagtggacctgccctttcaggagtat
gtggagcagatgctgcacccccaggaccccttctccatgggcaatgacaccctgtacttc
tttggggacaataacttcacggaatgggcatcactttttcggcactactctccacctcca
ttcaacctgctaggtaccattcctgcttatagctttggaattgcaggtgccggctctggg
gtgcccttccactggcacgggcccgggttctcagaggtgatctatggccgaaagcgctgg
ttcctgtaccctcctgcgaagacacctgaattccaccccaacaagaccacactggcctgg
ctccgggacacatacccggccctggcactatctgcacggcccctggaatgcaccatccac
gctggtgaggtgctgtatttccctgaccgatggtggcacgccacactcaacctcgagacc
agcgtcttcatctctacctttctcagctag
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