Phocoena sinus (vaquita): 116740252
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Entry
116740252 CDS
T07759
Symbol
BRAT1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116740252 (BRAT1)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116740252 (BRAT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
116740252
NCBI-ProteinID:
XP_032461576
Ensembl:
ENSPSNG00000019766
LinkDB
All DBs
Position
15:complement(86390643..86406570)
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AA seq
873 aa
AA seq
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MDPECSRLLPALCAVLADPRQPVADDTCLEKLLDWFTAVTEAGSSLLLLQENPCLVELLF
HVLKSQDLSSRILSFSLRLAGIFAAQEDCFQYLQQGELLPMLFGEVGPLGGAAWTAPAVR
SGWIQGLRTLAQHPSALHFLAACGAVDTIFSLQGDPSLFVASAAGQLLVHILDLAMRGPA
EGRRSPQACDWPACAQKIVGHIEDSLCSTAIPQVTQALSVLTTAFGHCHGLWTQGLWVRL
SPLVARLLEKDPVPASHSLVDLLLSVARSAPSSDRGLWETLAQTLSHLSPTQAGPLALGI
LKLQDCFIHRLPKDKRDSWSSPAQSRAGFILRTCSAAFCHLPSGLTLWILGHPVPQALRT
QAFGILLQPLACVLEAAAQAPGPPGLLEGAAADSMMVDTLLSSKSACVGLLCCALAHLGL
LQPLLGCWASPTAAQRRPKTAVLCMSPLGQGLGFSCPMGSVPCFPWVATLVGWGGPRVGG
WVLQPSTSVSGPQELVTQVFSVLLEYLVSPESSSMVLKKAFQATLRWLLSSPKTPGCCDL
DPHTQLFLRELLPVLQKRLCSPCWEVRDSGLEFLTQMTRHWGGQAGFRQALLASEVPELT
KQLLRDPESYVRASAVTATGQLSSWGLCATPASPECPGAQQESLLVELLHILSTDSEGFP
RRAVMQVFTEWLRDGHADVAEDAERFVAGVLQAASRDLDWEVRAQGLELALVFLEQLLGQ
RSSHCPYAVALPETAPPGVLDQALQVLCRVQLFEFAFRALFDCDRPVAQKSCDLLLFLRA
KAAPCGSSQEAGDSPNVASVEATLQRWQAGEQGQPLGYLEPGAVVALLRSIDLEGLRDTL
AESSDHVEKSPQSLLQDMLAAVGVLGENEADCY
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggacccagagtgctcccggctcctccctgcgctctgtgccgtcctggcagaccccagg
cagcctgtggcagatgacacttgtttggagaagctgctggactggtttacagcggtaacc
gaagcagggtccagtctcctgttactacaggaaaatccctgcctggtagagctgctgttc
cacgtgttgaaatcccaggacctaagttccagaatcctctccttctcactccgcctcgca
gggatatttgcagcccaggaagactgcttccagtatcttcagcagggggagctgctgccc
atgctctttggggaggtgggccccctcggaggagcggcctggacggcccccgctgtgcgc
agcggctggatccagggcctgcgcaccctggcacagcatcctagcgccctgcacttcctc
gccgcctgtggtgcagttgacaccatcttctccctgcagggagatcccagcctgtttgtg
gcctcggcagccgggcagctcctggtgcacattctagacttggcgatgcggggcccggcc
gagggccgccgcagtccgcaggcttgtgactggccagcatgtgcccagaagatcgtgggt
cacatcgaagactccctgtgctccacagccatcccccaggtcacacaggccctgagtgtc
ctgaccactgcgttcgggcactgccacggcctttggacgcaaggcctttgggtgcggctg
agccccctcgtggcccgcctgctcgagaaagaccctgtcccagcctcacactcgctcgtg
gatctcctcctcagcgtggcccgttctgcgccgagctctgaccgtggcctgtgggagact
ttggcccagactctgagccacttgagccccacacaggcagggcctctggctttggggatc
ctgaaactgcaggactgctttattcacaggctccccaaagataaaagagactcttggagc
agccctgctcagagcagggctgggttcatactcaggacctgctcagctgccttctgccac
ctccccagtggcctcaccttgtggatcttgggccaccctgttccacaggcgctgaggacc
caggcctttggcatcctcctccagcccctggcctgtgtcctggaagctgctgctcaggcc
cctggacccccaggcttgctggagggggctgcagctgactcgatgatggtggacacgctc
ctctcctccaagtcggcctgtgtgggtctcctgtgctgcgctctggcccacctggggctg
ctgcagccgctgctcgggtgttgggcgagccccacagctgctcagagacgtcccaagact
gctgtcctctgcatgtctcctctggggcaggggctgggattcagctgcccgatgggttct
gtcccctgttttccttgggttgccacacttgtgggctggggaggccccagggtaggaggt
tgggtgcttcagccatccacgtctgtctcaggccctcaagagttggtgacgcaggtgttt
tccgtcctcctggagtacctcgtgagccctgagtccagctccatggttctgaagaaggcc
ttccaggccacactcaggtggctcctgagctcacccaagacccccggctgctgcgacctg
gacccccacacccagctgttcctcagagagctgcttcctgtgctccagaagcgcctgtgc
agcccctgctgggaggtaagggactcaggcctcgagttcctgacccaaatgaccagacac
tggggagggcaggccggcttcagacaagcgctccttgcttcagaggtgcccgagctcacc
aagcagcttctgcgagaccctgagagttacgtccgtgcgagtgcagtgaccgccacaggg
cagttgtctagctgggggctgtgtgccacccctgccagccctgagtgcccaggggctcag
caggagagcctgctcgtggagcttctgcacatcctctccacagactcggagggcttcccc
cggagggccgtcatgcaggtcttcactgagtggctgagggatggccatgctgacgtagct
gaagacgcggagcggtttgtggctggagtgctccaggcggcgagcagggacttggactgg
gaggtgcgagcccagggcctcgagctggcactggtgttcctggagcagttgctgggtcag
cgcagctcccactgtccctatgccgtggccctgcccgagacagccccacctggcgtgctg
gaccaggccctgcaggtgctctgccgtgtgcagctctttgagtttgccttccgtgccttg
tttgactgtgaccgacctgtggcccagaagtcctgtgatctcctcctattcctgagggcc
aaggctgctccctgtggcagctcgcaggaggcgggggacagtcccaacgtggcctctgtg
gaggccaccctgcagagatggcaggcaggtgaacagggtcagcccctggggtacctggag
cccggggccgtcgtagctctgctgaggtctatagacctggagggccttcgggacaccctg
gctgagagcagtgaccatgtggagaagagcccccagtcactcttgcaggacatgctggct
gccgtgggcgtcctcggggagaatgaggccgactgctactga
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