Phocoena sinus (vaquita): 116740278
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Entry
116740278 CDS
T07759
Symbol
SRSF6
Name
(RefSeq) serine/arginine-rich splicing factor 6 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
psiu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116740278 (SRSF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116740278 (SRSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116740278 (SRSF6)
Spliceosome [BR:
psiu03041
]
Common components
Common spliceosomal components
SR proteins
116740278 (SRSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
116740278
NCBI-ProteinID:
XP_032461640
Ensembl:
ENSPSNG00000021543
LinkDB
All DBs
Position
15:complement(16714587..16720433)
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AA seq
346 aa
AA seq
DB search
MAAARGCGSARGERGRVRARPRPNDSRRSPALAPPLRYGFVEFEDSRDADDAVYELNGKE
LCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSS
RCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLI
EDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSK
GRKSRSKSKSKPKSDRGSRSRSRSRSKDEYEKSRSRSRSRSRSPKENGKGDIKSKSRSRS
QSRSNSPLPAPPSKARSVSPPPKRASRSHSRSHSKSRSRSRSSSRD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcggggctgcgggagcgcgcggggggagcgggggcgcgtgcgtgcgcgc
ccccggcctaacgactcccgccggtctcccgccctcgcaccgcccctcaggtacggcttc
gtggagttcgaggactcccgcgacgccgacgacgccgtttacgagctgaacggcaaggag
ctctgcggcgagcgcgtgatcgtggagcacgcccggggcccgcgccgcgatcgtgacggc
tacagctacggaagccgcagtggtggaggtggatacagcagtcggagaacctctggcaga
gacaaatatggaccacctgtacgcacagaattcaggcttattgtagaaaatctttctagt
cgttgcagttggcaagatttaaaggatttcatgagacaagcaggtgaagtaacctatgcg
gatgctcacaaagaacgcacaaatgaaggcgtcattgagtttcgctcctactctgacatg
aagcgtgctttggataagctggatggtacggaaatcaatgggagaaatattagactaatt
gaagataaaccacgaacaagccacaggcggtcttattctggaagcagatcaaggtcacgg
tctagaagaaggtcacgaagtaggagtcgtaggagcagccgcagtagatctcgaagtatc
tcaaaaagtcgctcccgatccaggtctcggagcaaaggtcgatcacgttctcgttcaaaa
ggcaggaaatctagatcaaaaagcaaatctaaacctaagtctgatcgaggctcccgttcg
cgctctcggagcagatcgaaggatgaatatgagaaatctcgaagcaggtctcgttctcga
tctcgttcccccaaagaaaatgggaaaggtgatataaagtcaaaatccagatcaaggagc
cagtctcgttccaattcacccctacctgctccaccctcaaaggcccgttctgtgtcccct
ccaccaaaaagagcttcaagatcccattctagatctcattcaaagtcaaggtcacgatcc
agatcgagttccagagattaa
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