Phocoena sinus (vaquita): 116740338
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Entry
116740338 CDS
T07759
Symbol
CAPN2
Name
(RefSeq) calpain-2 catalytic subunit
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
psiu04210
Apoptosis
psiu04217
Necroptosis
psiu04218
Cellular senescence
psiu04510
Focal adhesion
psiu05010
Alzheimer disease
psiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116740338 (CAPN2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116740338 (CAPN2)
04217 Necroptosis
116740338 (CAPN2)
04218 Cellular senescence
116740338 (CAPN2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116740338 (CAPN2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116740338 (CAPN2)
05022 Pathways of neurodegeneration - multiple diseases
116740338 (CAPN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116740338 (CAPN2)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
116740338 (CAPN2)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C2: calpain family
116740338 (CAPN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
116740338
NCBI-ProteinID:
XP_032461782
Ensembl:
ENSPSNG00000000652
LinkDB
All DBs
Position
1:complement(164392932..164454799)
Genome browser
AA seq
700 aa
AA seq
DB search
MAGIAVKLAKDREAAEGLGSHERAVKYLNQDYAALRDECLEAGALFQDPSFPALPSSLGF
KELGPYSSKTRGIEWKRPTEICDDPQFITGGATRTDICQGALGDCWLLAAIASLTLNEEI
LARVVPLDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTKDGELLFVHSVEGSEFWSAL
LEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELRKAPPNLFRIIQKALQKGSLLGC
SIDITSAADSEAITFQKLVKGHAYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDN
CPNWTTIDPEERERLTRRQEDGEFWMSFNDFLRHYSRLEICNLTPDTLTSDTYKKWKLTK
MDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDQEDGENGCTFLVGLIQKHRRRQR
KMGEDMHTIGFGIYEIPEELTGQTNVHLSKSFFLTHRARERSDTYINLREVLNRFKLPPG
EYILVPSTFEPNKDGDFCIRVFSEKKADYQVVDDEIEATLEEIDVSEDDIDDGFRRLFAQ
LAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYIL
WTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFD
NFVRCLIRLETLFRIFKQLDPEDTGMIQLDLMSWLCFSVL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcgcggtcaagctggcgaaggaccgggaggcggccgaggggctgggctcg
cacgagagggccgtcaagtacctcaaccaggactacgcggcgctgcgggacgagtgcctg
gaggccggggcgctcttccaggacccgtccttcccggccctcccgtcttccctgggcttc
aaggagttgggaccctactccagcaagacccggggcatcgagtggaagcggcccacggag
atctgcgatgatccacagtttattactggaggagccactcgcacagacatctgccaagga
gccctgggggactgctggctactggcagccattgcctccctcaccttgaatgaagaaatc
ctggcccgagtcgtccccttggaccagagcttccaggagaactacgcggggatcttccac
ttccagttctggcagtacggcgaatgggtggaagtggtggtggacgacaggctgcccacc
aaggacggggagctgctcttcgtgcactcggtagagggcagtgagttctggagcgcgctg
ctggagaaggcctacgccaagatcaatgggtgttacgaagcactctccgggggtgccacc
accgagggcttcgaggacttcaccggaggcatcgccgagtggtatgagttaaggaaggcc
cctcccaacctgttcaggatcatccagaaagctctgcagaaaggctctctccttggctgc
tctatcgatatcaccagtgctgcagactcggaggccatcaccttccagaagctggtgaag
gggcacgcatactcggtcactggcgccgaggaggtggaaagcagaggaagcctgcagaag
ctgatccgcatccggaatccctggggagaggtggagtggaccgggcagtggaacgacaac
tgcccaaactggaccactattgacccagaggagagggaaaggctgaccagacggcaggaa
gatggggaattctggatgtctttcaacgacttcctgaggcactattcccgcctggagatc
tgcaacctgacccctgacacgctgaccagtgacacctacaagaagtggaagctcaccaag
atggatgggaactggaggcggggctccaccgcgggcggctgcaggaactacccgaatacc
ttctggatgaaccctcagtacctgatcaagttggaggaggaggacgaagaccaggaggac
ggggagaacggctgcaccttcctggtgggtctcatccagaagcaccggcgacggcagagg
aagatgggcgaggacatgcacaccattggcttcggcatctatgagattccagaggagttg
acaggacagaccaatgtccacctcagcaagagcttcttcctgacgcaccgagcgagggag
cggtcggacacctacatcaacctgcgggaggtgctcaaccgcttcaagctgcccccgggg
gagtacatcctggtgccatccaccttcgagcccaacaaggacggggacttctgcatccgg
gtcttttccgagaagaaagctgactaccaagttgtcgacgacgaaatcgaggccaccctt
gaagagattgatgtcagcgaggacgacatcgatgatggattcaggaggctgtttgcccag
ttggcaggagaggatgcagagatctctgcctttgagttgcagacaatcctgagaagagtt
ctggcaaagcgccaagatatcaagtcagacggcttcagcatagagacctgcaaaatcatg
gttgacatgctcgattcggatgggagtggcaagctgggtctgaaggagttctacattctt
tggaccaagattcagaaataccaaaaaatttaccgggaaatcgacgtggacaggtccgga
accatgaactcctatgagatgcggaaagcattagaagaagcgggtttcaagatgccctgt
cagctccaccaagtcatcgttgctcggttcgcagatgaccagctcatcatcgattttgac
aattttgttaggtgtttgattcgactggaaacactattcaggatatttaagcagctggac
cccgaggatactggtatgatccagcttgaccttatgtcttggctgtgtttttcagtactt
tga
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