Phocoena sinus (vaquita): 116740355 Help Entry 116740355         CDS       T07759                                  Symbol SRCAP Name (RefSeq) helicase SRCAP isoform X1   KO K11661   helicase SRCAP/SWR1 [EC:5.6.2.-] Organism psiu  Phocoena sinus (vaquita) Pathway psiu03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:psiu00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     116740355 (SRCAP)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:psiu03036]     116740355 (SRCAP) Chromosome and associated proteins [BR:psiu03036]  Eukaryotic type   Chromatin remodeling factors    SRCAP complex     116740355 (SRCAP)    SWR1 complex     116740355 (SRCAP) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HSA ResIII DEAD HDA2-3 Motif Other DBs NCBI-GeneID:  116740355 NCBI-ProteinID:  XP_032461809 Ensembl:  ENSPSNG00000017827 UniProt:  A0A8C9CPI5 LinkDB All DBs Position 15:72335580..72369039 Genome browser AA seq 3176 aa AA seqDB search MQSSPSPAHPQLPILQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP PGPPDGATVPLEGLSLPQAADLANKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT EKYSDLLSQSLNQPLTSSKAGSSPCLGSSSAASSPPPPVSRMDDEDGDFQPQEEEEEDDE ETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGGPSSPSRTPSSHDSD TRDGPEEGGEEESSQVLKVKPPPSSVTQRNKQPWHPDEEDEEFAANEDEAEDEEDTIAAE EQLEGEVDHAMELSELAREGELSVEELLQQYAGAYASDASAPGSGSSEEEDEDEVEANSS DCEPEAATEAEEATQEDSSSQSDSAEEQSEDEEDEHSEEEETSGSSESEESESEESEESQ SQSQADEEEEEDDDFGVEYLLARDEEQSEADGGSGPPTPGPTTTLGPKKEITDIAAAAES LQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQT ISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWT KPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLL TGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVL RPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINI LMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDLIGLEG RVSRYEADTFLPQHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPMPKQEGRTVVVVN SPRTPLGPVPVRPPPGPELSAQPTPGPTPPVLPAPLMVSASPSGPPLIPASRPPGPVLLP PLQPNGGPLPQVMPSPLGVLSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSSLLKPLTV PPGYTFPSAAVTTTCTTTATAPTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLASL AQRPVASTGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQMPPTMVNNTGVVKIVVRQ APRDGLTPVPPLAPAPRPPSSGLPAVLTPRPTLTPGRLPTPALGTARAPIPTSTLVRPLL KLVHSPTPEVSASAPGAAPLTISSPLPVSSSLPGPASSPMPVPNSSPLASPVSSTVPVPV SSSLPISVCTTLPSPASAPLTIPISAPLPVSASGPALLTNVTPTLAAAPGPPSLAPVGAS PSASALTLGLATTPSLSPSQAPGHPLLLAPASSHVPGLNSAVAPACSPVLVPASALASPF PAASNQAPAQASLLAPAPTASQALATSLAPMVAPQTAILAPSPAPSLAPLPVLAPSLGPT PVLAPSQTSVPLLASASTPGTPLASASSLVPAPAPVLAPSSAQTMVPAPVPSPLPSPAST QTLALPPALASTLGGSSPSQTLSLGTGNPQGSFPAQTLSLTPAASLVPAPAQTLSLAPGP PLCPSQTLSLAPAPPLAPVSPMGPAPAHTLTLATVSSSASLLAPASVQTLTLSPAPVPVP TLGPAAAQTLALAPASTQAPDSQASSLVVSATGAAPLPVTMVSRLPVSKDEPETLTLRSG PPSPPSTATSFSGPRPRRQPPPPPRSPFYLDALEEKRKQQRSERLERIFQLSEAHGALAP VYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAARQAVLFPQQRLDQLSEIIERF IFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLARELWPRARPLHRIVCNMRTQFPDLR LIQYDCGKLQMLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVE QRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIG QTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEE PSGSSIPSAPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDG FPAADGEEAGRPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAE EQVEAARKDLDQAKEEVFRLPQEEEEGPGAGDEVSCGTGGGSHRRSKKAKAPERPGTRVS ERLRGARAETQGANHTPVTSMHHPRNTSTPPRCSPARDRVPRPAPRPRPTPASAPAAIPA PVPAPISAPIPISAPNPITMLPVHILPSPPLPSAQIPPSCSSACTPPPACTPPPAHTPPP AQTSLLTPSSPLLLGLPSVPISPPVTNLPLGMGPEAELCAQAMASTESLELADMASSETS PITLVPPKDLLPVAVEILPMSEKNLSLTSSAPSPNLAAGSVPNGQEQEVPEPAEATILSV LPDGEEVATCLSESNRLELPPSAASDELLQEPLKADKNSEELVEAQTPTSTPEKPQELVS AEAAAPSTSSSATSTPEGPSPARPPRRRTSADVEIRGQGAGRPGQPPGPKVLRKLPGRLV TVVEEKELVRRRRQQRGAASTLVPGVSETGASPGSPSTRSMSGPESSPPTSGPCEAAPPS TLPIPTQQPFIARCRIELGLTGGGSPENGEGALLAITPPAVKRRRGRPPKKNRSPADAGR GVDEAPSSTSKGKTSGADSVPGAETLIVAEPVLAPQLIPGPQPLGPQPVHRPEPVILSPV EKRRRGRPPKARDLPIPGTISSPGDGSLESRTQPLPIPPPLPPLPPLLACPTATVANTVT TLTISTSPPKRKRGRPPKNPPSPRPSQLPVLDRDSSPVLESCGLGKQRQPQGQGESEGSS SDEDGSRPLTRLARLRLEAEGMRGRKSEGSMVVAVIQDDLDLADSGPGGLELTPPVVSLA PKLRSTRLRPGSLVPPLETEKVPRKRAGAPVGCGPGLAKRSRLQPPSPLGPEGSVEESEA EASGEEEEGDGTPRRRPGPRRLGGATNQGDQRILRSSAPSHLAGPTISHRGRKAKT NT seq 9531 nt NT seq  +upstreamnt  +downstreamnt atgcagagcagcccctcccctgctcaccctcagctcccaatcttgcaaacacagatggtg tcggacggcatgacaggcagcaatcctgtgtcccctgcctcatccagttccccagcctct agtggggcaggtggcatctccccccagcatatagctcaagattcctctttggatggacct ccagggcccccagatggtgccacagtgcccctggaggggctcagcttaccccaggctgct gacctggctaacaagggcccaaagtgggagaagagccatgctgagattgcagagcaggcc aagcatgaggctgagattgagactcggattgctgagctgcggaaggagggtttctggtca ctgaagagactgcctaaagtgcccgagcctccccgccccaagggccactgggactatctg tgtgaggagatgcagtggctctctgccgactttgctcaggagcgccgttggaaacggggt gtggcccgtaaggtggtgcgaatggtgatccggcaccacgaggagcagcggcagaaagag gaacgggcccggagggaggagcaggccaagctgcgccgaatcgcctccaccatggccaag gatgttaggcagttttggagcaatgtggagaaggtggtgcaattcaaacaacagtcccgg cttgaggaaaagcggaaaaaagccctggacctgcacctggacttcatcgtggggcaaact gaaaagtactcagaccttctgtctcagagcctcaaccagccactaacctccagcaaagct ggttcctccccttgccttggctcttcctcagctgcctctagtcctccacccccagtttcc cggatggatgatgaagatggggacttccaaccccaagaggaggaggaagaggatgatgag gagacgattgaggttgaagaacaacaggaaggcaatgatgcagagacccagaggcgtgag attgagctacttcgacgtgagggagaactgccactggaagagctgctccgttccctcccc cctcagctgctaggagggccttccagcccctcaagaaccccctcatctcatgatagtgac acccgagatgggcctgaagaaggtggtgaagaagagtcctctcaggtgttgaaggtaaag cccccaccctcctctgtcacacagcgcaacaaacagccttggcatccagatgaggaggat gaggagtttgctgccaatgaagatgaagcggaggatgaagaggataccatagcagctgag gagcagttggaaggggaggtggatcatgccatggagctgagcgagttggctcgagaaggt gagctgtctgtggaggagctactgcagcagtacgcaggagcctatgcctctgatgcctct gccccaggttctgggagtagtgaagaggaagatgaagatgaagttgaggctaacagctct gactgtgaaccagaggcggccacagaagctgaggaggctactcaagaggatagtagcagt cagtcagactctgctgaggaacagagtgaggatgaggaagatgagcattcagaagaggaa gagacaagcgggagttcggaatcggaggaatctgagtctgaggaatctgaggagtcccag tcacagagccaagcagatgaggaagaggaggaagatgatgactttggggtggagtacttg cttgccagggacgaagagcagagtgaggcagatggaggcagtggacctcccaccccaggg cccaccaccactctaggccctaagaaagaaattactgacatcgctgcagcagctgaaagt ctccagcccaagggttataccttggccactacccaggtgaagacacccatccccctgctc ctacggggccagctccgggagtaccaacacattgggctggactggctggttactatgtat gagaagaagcttaatggcattcttgctgatgagatggggctaggcaagacgatccagacc atttccctgcttgcccacttggcctgtgagaaaggtaactggggtccccatttgatcatt gtccccaccagcgtgatgttgaactgggagatggagctgaaacgttggtgccccagcttt aaaatccttacttactatggagcccagaaggagaggaagctcaagcggcagggctggacc aagcccaatgccttccatgtgtgtatcacatcttacaagctggtgctgcaggaccaccag gccttccgccgcaagaactggcgctatctcattctggatgaggctcagaacatcaagaac ttcaagtctcagcgctggcagtcattgctcaacttcaacagccagagacgcctgctcctg acaggaacacccttgcagaacagcctcatggaactgtggtccttgatgcactttttgatg ccccatgtcttccagtctcatcgcgagttcaaagaatggttctctaatcccctaactggc atgattgagggcagccaagagtacaatgaaggtctagtcaaacgccttcacaaggttttg cggccttttttgctgcgccgagttaaggtggatgttgagaagcagatgcccaaaaaatat gagcatgttatccgctgccggctctccaagcgccagcgctgtctctatgatgacttcatg gcacagaccacaactaaggagacactagccacgggccatttcatgagcgtcatcaacatt ttgatgcagctgcggaaagtctgcaatcatccaaacctgtttgaccctcgacccgttacc tcccccttcatcactccaggcatctgtttcagcaccgcctctctggtgctaagggccact gatgtccaccctctccagcggatagacatgggtcgatttgatctcattggcctggagggt cgtgtctctagatatgaggccgacacatttctaccccagcaccgcctttcccgccgggtt ctgctagaggtggctactgctccagaccccccaccccggcccaagccggtcaagatgaag gtcaacaggatgctgcagccaatgcccaagcaagaaggccggacagtggtggtggtgaac agtccacggactcctctgggccctgtcccagtccgaccccctccaggccctgagctctca gcccagcccacccctggcccaacccccccagtgctgccagcaccactgatggtgtcggcc tcgccttccgggcccccactcattccggcatcccggcctcctggccctgttcttttgccc ccactgcagccaaacggtgggcctcttccccaggtgatgccatcccctctgggggtcttg agtgggacctcacggcctcccacgccaaccctatccttgaagccagccccacctgctcct gttcgcctgagccctgccccgcccccaggctcctccagcctgttgaagccccttaccgtg ccaccaggctataccttcccttctgctgctgtcaccaccacctgtaccaccacagccacg gctcccaccacggcagtgccagctcctactcctgctccacagcgcctcatcctgtctccc gatatgcaagctcgcctgccctcaggtgaagtggtcagcatcgggcagttagcctcactg gcacaacggccagtggctagtacagggggaagcaaacctctcaccttccaaatccagggc aacaagctgactttgactggtgcgcaggtgcgccagcttgctgtggggcagccccgcccg ctgcaaatgccaccaaccatggtgaataatacaggcgtggtgaagattgtagtgagacag gcccctcgggatggactgactcctgttcctccgttggccccagcaccccggcctccgagc tctgggcttccagctgtgttgactccacgccccacattaacccctggccggctacccaca cctgctctgggtactgcccgggctcccatacccacgtccactctggtgaggccacttctc aagctggtccacagtcctacgcctgaagtcagtgcttcagcacctggagctgctcctttg accatctcttctcctctccccgtgtcatcctcactacctgggccagcctcttctccaatg ccagttcccaactcctctccccttgctagtcctgtgtcttctacagtcccagttccagta tcatcttcactccccatctctgtctgcacaacgcttccgtccccagcctcagctccactc accatccccatctcagcccccttgcctgtttcggcttcaggcccagctctgttgactaat gtgactccaacactggcagcggctcctggacctccctccttggcaccagttggggcttct ccatcagcgtcagccttgactctaggtttggccacaactccatccctgtccccatctcag gcacctggtcaccctttgttgttggctccagcctcttcacatgttccaggtttgaactca gccgtggccccagcatgttcacctgtcctggtgccagcttctgctctggccagtcctttt ccggcagcatcaaatcaagctccagctcaggcttcccttttggctccagcacctactgca tctcaggctctagccacctctctggctcccatggtggctccacagaccgcaatcctggct ccttctccagctccttctctggctcctcttccagtcctggctccatcactaggtcctact cctgtactggctccatcgcagacttcggttccacttctggcttcagcatctactccagga actcctttagcctcagcttcctcactggtgccagccccagctcctgtgttggctccatca tcagctcaaactatggtaccagccccagttccgtcacctctcccgagtccggcttctacg cagacactggctttacccccagctttagcatccactcttggcggatcgtctccatctcag acactctctttgggaactgggaacccccaaggttcttttccagctcagacattgtcattg actccagcagcatccctagtaccagctccagcccagacactgtctttggcaccgggacca ccactgtgtccatctcagacgctgtctttggctccagcaccccctctggctccagtttct ccaatgggcccggccccagctcacacactgactttggctacggtgtcgtcatctgcttca ctcctggccccagcttcagtgcaaacactgaccttgagccctgccccagtgccggtgccc accttgggcccagcggcagctcagactctggcactggccccagcctcaacacaggcccca gattcccaggcatcttccctcgtggtttcggcaactggtgccgctcccttgcctgtcacc atggtatcccggctgcctgtttccaaggatgagcctgagacactgacattacgctctggt ccccccagccctccctccactgctacctcgttcagtggtccccgacctcgacgccagccc ccaccaccacctcgttcccctttctatctggacgctctggaggaaaagcggaagcagcag cggtctgaacgcctggaacggattttccaacttagtgaggctcatggggccctggcaccc gtgtatgggactgaagtcttggatttctgtaccctgccccaacctgttgccagccccatc ggccctcgttctcctggccccagccaccccaccttttggacttataccgaggctgcccgc caggctgtactgtttccccagcaacgactagaccagctgtcagaaatcattgagaggttc atctttgtcatgcctcctgtggaggcacctcccccttccttgcacgcctgccacccacct ccttggctggcccctcgtcaggcagccttccaggagcaattggctcgtgagctctggccc cgggctcgtcctttgcaccgtattgtgtgtaacatgcgtacccagtttcctgacctgagg cttatccagtatgattgcggaaagttgcaaatgttggcagtgctgttgcgacagctcaag gcggagggccaccgggtgctcatattcacccagatgacccgaatgctggatgtgttggag cagtttctcacctaccatggccacctctacttgcgtctggatgggtctactagagttgaa cagagacaggccttgatggaacgattcaatgcagacaaacgcatattctgcttcatcctt tcaactcggagtgggggtgtgggcgtgaacctgacgggggcagacactgttgttttctat gacagcgactggaatcctaccatggatgctcaggcccaggatcgctgtcaccgaattggc cagacccgagatgtccacatatataggcttatcagtgaacggacagtggaagagaacatc ctaaaaaaggcaaaccagaagagaatgttgggagacatggcaattgagggaggcaacttc accacagcctattttaaacagcagaccatccgagagctgtttgatatgcctctggaggaa ccatctggctcatctataccctctgcccctgaagaagaggaagagactgtggccagcaag cagacccatatcctggagcaggcattgtgtcgggcagaggatgaagaggatatccgtgcg gccacccaggccaaggctgaacaggtggctgagcttgcagaattcaatgagaatgatggg tttcctgctgctgacggagaggaggctggtcggcctggggctgaagatgaggagatgtcc cgggctgagcaggaaattgctgcccttgtagaacagctgacccccattgagcgctatgcc atgaaattcctggaagcctcactggaggaggtgagccgagaggagctcaagcaggcagaa gagcaagtggaagctgcccgcaaggacctggaccaagcgaaggaggaggtgttccgccta ccccaggaggaggaggaggggccaggggctggggatgaggtttcctgtgggactggtgga ggcagccaccggcgcagtaagaaggccaaggcccccgaaaggccagggactcgcgtcagt gagcgtcttcgtggagcccgggctgaaactcaaggggcaaaccacactcctgtcacatcc atgcatcacccccgcaacacctccacacccccccgctgcagccctgccagggaccgagtt ccccggccagcgcctaggcctcgacccactccagcttcagctcctgctgcaattcctgcc ccagtccctgccccaatctctgccccaatccccatttcagccccaaatccaataaccatg cttcctgtccatatcttgccttctccccctcttccttctgcacagattcctccctcttgt tcttctgcctgtacccctcctcctgcctgtacccctccaccagctcataccccacctcca gcccagacttctctcttaactccttcctcccctctcttgcttggtctaccttctgtgccc atttccccaccagtcaccaacctccccttgggcatggggcctgaggcagagctgtgtgca caagcaatggcatctactgagtccctggagctggctgatatggccagttccgagacttcc ccaattactcttgtgccccctaaggatctgttgccagttgctgttgagatcctgcctatg tcagagaagaacctttctctcacctcttctgcacctagcccaaacctggcagctggcagc gtccccaacggtcaagagcaggaggtgcccgagcctgctgaggcgaccatcctctcagtg ctgcctgatggtgaggaagtggccacgtgtctgagtgagagcaataggctggagctccca ccctcagcagcatctgatgagctacttcaggagccactgaaggctgacaagaactcagaa gagctggtggaagcccagaccccaacgtctaccccagagaaaccacaggaacttgtttca gctgaggccgcagccccatcaacctcatcctcggccacctccacacctgagggtccttcg cctgcccggccccctcggcgtcgcaccagtgccgatgtagaaattaggggtcagggggct ggtcggccagggcagcctccaggtcccaaagtgcttcgcaagctgccaggacggctagtg actgtggtagaggaaaaggaactggtgaggcgacggcgacagcagcggggagctgccagc accctagtgcctggggtctctgagactggtgccagcccgggaagcccatctacccgcagc atgtcggggccagaatcctcacctcccaccagtggtccctgtgaagctgctcccccatcc acactgcccatcccaacccagcagcccttcatagctcgctgtcgcattgagctggggctg actggtgggggcagcccagaaaatggagaaggggcactacttgccatcacccctcctgct gtgaaacgtcgcagggggaggccccccaagaagaacaggtctccagcagatgctgggcga ggggtggatgaggcaccttcatccacctctaagggaaaaaccagtggggctgactcagtc cctggggctgagacccttattgttgcggagcctgtcctggcaccccagcttattcctggg ccccagcctcttggaccccagccagttcatagacccgagcctgtcatcctatcacctgtg gagaaaagaaggcgtgggcggccccctaaggcccgagatttgcccattcctgggaccatt tcctctccaggggatggcagcttagagagccggacacagccactcccgataccgccaccc ctgccaccgctcccaccactcctagcctgtcccactgctactgtcgccaacactgtcacc actctcaccatttcaacatccccacccaagcggaagcggggccgacctcccaagaatcca ccgtcacctcggcccagccagctccctgtcttggaccgcgacagctctcctgtccttgag agctgtggattggggaagcagcggcaaccccagggccagggggagagtgagggtagttca tctgatgaggatggaagccgccccctcacccgcctggcccgcttacgtcttgaagcagaa ggaatgaggggacgaaagagtgaagggtccatggtagtggctgtaattcaggatgatctg gatttagcggatagtgggccaggcgggttagaattgacacctcccgtggtctcattggct ccaaaactgcgttcgacccggctgcgtccagggtctctagttcccccactagagactgag aaggtgcctcgcaaacgggcaggggccccagttggctgtggtcctgggctggcaaagcgg agccgcctgcagcccccaagtcccctggggcctgagggttcagtagaggagtctgaggct gaagcctcaggtgaggaggaggaaggggatgggaccccacggcgccggcctggcccccgc cggcttggtggggccaccaaccaaggggaccagcgtattttgcgcagcagcgccccttcc cacttggctggccctaccattagtcacagaggccgtaaagccaagacgtga

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