KEGG   Phocoena sinus (vaquita): 116740440
Entry
116740440         CDS       T07759                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04066  HIF-1 signaling pathway
psiu04120  Ubiquitin mediated proteolysis
psiu05170  Human immunodeficiency virus 1 infection
psiu05200  Pathways in cancer
psiu05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116740440
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    116740440
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    116740440
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    116740440
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    116740440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psiu04121]
    116740440
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116740440
Ubiquitin system [BR:psiu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     116740440
   Cul5 complex
     116740440
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116740440
SSDB
Motif
Pfam: ubiquitin
Other DBs
NCBI-GeneID: 116740440
NCBI-ProteinID: XP_032461977
LinkDB
Position
15:37151675..37152633
AA seq 167 aa
MAAFATELNGDHVKNQARRGGAGPPGSGTLGASVCAARKGAELPASRRGEAVAGVDVFLK
IRRRKTIIFMEGKASSTMFLLKRIVEGILKQLPDEQRLYKDHRFLDDGKILGECGFTSQT
QPRVGLALQAGEAFETLPIKPFSSLPELPDVMKPQDPGSSANEQAVP
NT seq 504 nt   +upstreamnt  +downstreamnt
atggctgcttttgctacagagttgaatggagaccacgtgaaaaatcaagccaggcgaggc
ggggcggggccgccaggttcgggcaccctgggggccagcgtgtgcgctgccaggaagggg
gcggagcttccggctagtcgaaggggagaggcggtagccggtgtggacgtgttcctcaaa
atacggcgccgcaagaccatcatcttcatggaaggcaaagcgtccagcaccatgttcctg
ttgaagcgcatcgtcgagggcatcctcaagcagctgccagacgagcagcggctgtacaag
gaccaccggtttctggacgatggcaagatattgggtgagtgtggcttcaccagccagacc
cagccgcgggtggggctagccttacaggcaggtgaagcatttgagaccctgcccatcaag
cccttctccagcctaccggagttgccggatgtgatgaagccgcaggacccaggaagcagc
gctaatgaacaagctgtgccatga

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