KEGG   Phocoena sinus (vaquita): 116740516
Entry
116740516         CDS       T07759                                 
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL
  KO
K23195  transcriptional repressor CTCF
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psiu03000]
    116740516 (CTCFL)
   03036 Chromosome and associated proteins [BR:psiu03036]
    116740516 (CTCFL)
Transcription factors [BR:psiu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    116740516 (CTCFL)
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    116740516 (CTCFL)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-H2C2_5 zf-C2H2_16 Zf-C2H2_ZNF451_C zf-C2H2_jaz zf-C2HE C2CH-3rd_BIRD-IDD zf-AtTam37 zf-C2H2_7th_ZNF462 zf-C2H2_15 Zf-C2H2_ZNF451_1st zf-C2H2_6 Zn_ribbon_8 DUF7479 HTH_KIF26A_B_1st Zap1_zf1
Other DBs
NCBI-GeneID: 116740516
NCBI-ProteinID: XP_032462050
LinkDB
Position
15:5464053..5486154
AA seq 373 aa
MKTHTNEKPYTCHLCLKAFRTVTILRNHINTHTGTRPYKCDDCDMAFVTSGERARHRRYK
HTHEKPFKCSMCAYASVEASKLKRHIRSHTGERPFQCHLCSYAGKDAYKVKRHMRTHSGE
RPYECHVCHARFTQRGTMKIHVLQKHGENVPKYQCPHCDTVTARKSDLRVHLLKLHTYEA
AEMKCRYCSAVFHERYALIQHQKTHKNEKRFKCEHCSYACKQKRHMAVHVRTHTGEKPFA
CLSCNRRFQQKQLLNVHVKKYHDTTFVPTVYRCPRCGKGYSRLNNMQRHLKKCGSRREKP
TTSEKGRRTKMRKPTIPKEAAEEDEAAAEEASLVSGEQCPGGLVPIDFGEATAGGEDPDE
DMTCEMILAMMEK
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaaaactcacaccaatgaaaagccctatacgtgtcacctttgcctgaaagctttccgt
actgttactatccttcggaatcatatcaacacccatacaggaaccaggccctacaagtgt
gatgactgtgacatggcatttgtcaccagtggagaacgtgcccgacacagacgttataaa
cacactcacgagaagccctttaaatgttccatgtgcgcatacgctagcgtagaggcaagt
aaactgaagcgccacatccgttcgcacacgggcgaacgcccctttcagtgccatctctgt
agctacgccggcaaagacgcctacaaggtgaaacggcacatgaggacgcattccggtgag
aggccctacgaatgccacgtctgccacgcacgcttcacccagagggggaccatgaagata
cacgtcctgcagaagcacggcgagaacgtccccaagtaccagtgcccgcattgtgacacc
gtcactgcaaggaagagcgacctgcgtgtccatttgctcaagctgcatacgtacgaagct
gcagagatgaagtgccgctactgttccgctgtcttccacgagcgctatgctctcattcag
caccagaaaactcacaaaaacgagaagaggttcaagtgtgaacactgcagctacgcctgc
aagcagaaacgtcatatggcagttcacgtacgtacccacactggagagaagccgtttgcc
tgcctctcctgcaacagacgtttccaacagaagcaacttctaaacgtgcacgtcaagaaa
taccatgatacaactttcgtcccgactgtttacagatgccccaggtgtggcaaaggctat
tcccgcttgaataacatgcagagacacctgaaaaagtgtggctccaggcgagaaaagcca
accacctcggaaaaaggaagacgaacaaaaatgaggaagccgaccatcccgaaagaggca
gccgaggaagacgaagccgctgccgaggaggcctccctggtgagcggagagcagtgcccg
ggagggctggttcccatcgacttcggagaagccacggctggaggcgaggacccggatgaa
gacatgacctgtgagatgatcctggccatgatggagaagtga

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