Phocoena sinus (vaquita): 116740516
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Entry
116740516 CDS
T07759
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116740516 (CTCFL)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116740516 (CTCFL)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116740516 (CTCFL)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116740516 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2HE
C2CH-3rd_BIRD-IDD
zf-AtTam37
zf-C2H2_7th_ZNF462
zf-C2H2_15
Zf-C2H2_ZNF451_1st
zf-C2H2_6
Zn_ribbon_8
DUF7479
HTH_KIF26A_B_1st
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
116740516
NCBI-ProteinID:
XP_032462050
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Position
15:5464053..5486154
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AA seq
373 aa
AA seq
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MKTHTNEKPYTCHLCLKAFRTVTILRNHINTHTGTRPYKCDDCDMAFVTSGERARHRRYK
HTHEKPFKCSMCAYASVEASKLKRHIRSHTGERPFQCHLCSYAGKDAYKVKRHMRTHSGE
RPYECHVCHARFTQRGTMKIHVLQKHGENVPKYQCPHCDTVTARKSDLRVHLLKLHTYEA
AEMKCRYCSAVFHERYALIQHQKTHKNEKRFKCEHCSYACKQKRHMAVHVRTHTGEKPFA
CLSCNRRFQQKQLLNVHVKKYHDTTFVPTVYRCPRCGKGYSRLNNMQRHLKKCGSRREKP
TTSEKGRRTKMRKPTIPKEAAEEDEAAAEEASLVSGEQCPGGLVPIDFGEATAGGEDPDE
DMTCEMILAMMEK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcacaccaatgaaaagccctatacgtgtcacctttgcctgaaagctttccgt
actgttactatccttcggaatcatatcaacacccatacaggaaccaggccctacaagtgt
gatgactgtgacatggcatttgtcaccagtggagaacgtgcccgacacagacgttataaa
cacactcacgagaagccctttaaatgttccatgtgcgcatacgctagcgtagaggcaagt
aaactgaagcgccacatccgttcgcacacgggcgaacgcccctttcagtgccatctctgt
agctacgccggcaaagacgcctacaaggtgaaacggcacatgaggacgcattccggtgag
aggccctacgaatgccacgtctgccacgcacgcttcacccagagggggaccatgaagata
cacgtcctgcagaagcacggcgagaacgtccccaagtaccagtgcccgcattgtgacacc
gtcactgcaaggaagagcgacctgcgtgtccatttgctcaagctgcatacgtacgaagct
gcagagatgaagtgccgctactgttccgctgtcttccacgagcgctatgctctcattcag
caccagaaaactcacaaaaacgagaagaggttcaagtgtgaacactgcagctacgcctgc
aagcagaaacgtcatatggcagttcacgtacgtacccacactggagagaagccgtttgcc
tgcctctcctgcaacagacgtttccaacagaagcaacttctaaacgtgcacgtcaagaaa
taccatgatacaactttcgtcccgactgtttacagatgccccaggtgtggcaaaggctat
tcccgcttgaataacatgcagagacacctgaaaaagtgtggctccaggcgagaaaagcca
accacctcggaaaaaggaagacgaacaaaaatgaggaagccgaccatcccgaaagaggca
gccgaggaagacgaagccgctgccgaggaggcctccctggtgagcggagagcagtgcccg
ggagggctggttcccatcgacttcggagaagccacggctggaggcgaggacccggatgaa
gacatgacctgtgagatgatcctggccatgatggagaagtga
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integrated database retrieval system