Phocoena sinus (vaquita): 116740558
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Entry
116740558 CDS
T07759
Symbol
GDF5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04060
Cytokine-cytokine receptor interaction
psiu04350
TGF-beta signaling pathway
psiu04390
Hippo signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116740558 (GDF5)
04390 Hippo signaling pathway
116740558 (GDF5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116740558 (GDF5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
psiu04052
]
116740558 (GDF5)
Cytokines and neuropeptides [BR:
psiu04052
]
Cytokines
Transforming growth factors (RSTK binding)
116740558 (GDF5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
116740558
NCBI-ProteinID:
XP_032462127
Ensembl:
ENSPSNG00000010716
UniProt:
A0A8C9BSR3
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Position
15:23858052..23865588
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AA seq
499 aa
AA seq
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MRLPKVLTFLLWHLAWLDLEFICTVLGAPDLGQRPQGARPGLAKAEAKERPPLAQNIFRP
GGHSYGGGATNARAKGGTGQTGALTQPKKDEPKKLPPRSGGPEPKPGHPPQTRQAATWTV
TPKGQLLGGKAPPKTGSVPSPFLLKKAREPGSPREPKEPFRPPPITPHEYMLSLYRTLSE
ADRKGGNNSVKLEAGLANTITSFIDKGQDDQGPAIRKQRYMFDISALEKDGLLGAELRIM
RKKPSDTAKPVAPSSGRAAQLKLSSCPSGRQPAALLDVRSMPGLDGSGWEVFDIWKLFRN
FKNLAQLCLELEAWERGRALDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARS
GQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNPKARCSRKALHVNFKDMGWDDWIIAPL
EYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSA
NNVVYKQYEDMVVESCGCR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagactccccaaagtcctcactttcttgctttggcacctggcttggctggacctggaa
ttcatctgcactgtgttgggtgcccctgacttgggccagagaccccagggggccaggcca
ggattggccaaagcagaagccaaggagaggccccctctggcccagaacatcttcaggccg
gggggtcacagctacggtgggggggccaccaatgccagggcaaaggggggcaccgggcag
acaggagccctgacacagcccaagaaggatgaacccaaaaagctgccccccagatcgggt
ggccctgaacccaagccaggacaccctccccagacaaggcaggctgcaacgtggactgtg
accccaaaaggacagcttcttgggggtaaggcaccaccaaagacaggatctgtccccagc
cccttcctgctgaagaaggccagggagcctgggtcccctcgagagcccaaggagccattc
cgcccgcccccaatcacgccccacgaatacatgctctcgctgtacaggacgctgtccgag
gctgacagaaagggaggcaacaacagcgtgaagttggaggctggcctggccaacaccatc
accagctttattgacaaagggcaagatgaccaaggtcctgcgatcaggaagcagaggtac
atgtttgacattagcgccctggagaaggatgggctactaggggccgagctgcggatcatg
cggaagaagccctcggacacagctaagccagtggcccccagcagtgggcgagctgcccag
ctgaagctgtccagctgccccagcggccgacagccggcggccttgctggatgtgcgttcc
atgccaggcctggatggatctggctgggaggtgttcgacatctggaagctcttccgaaac
tttaagaacttggcccagctgtgcctggagctggaggcctgggaacggggccgggctctg
gacctccgtggcctgggctttgaccgggctgcccggcaggtccatgagaaggccctgttc
ctggtgtttggccgcaccaagaaacgggacctgttctttaatgagattaaggcccgctct
ggccaagatgataagaccgtctacgagtacctgttcagtcagcggcgaaagcggcgggcc
ccactggccacacgtcagggcaagcggcccagcaagaaccccaaggcccgctgcagtcgg
aaggcgctgcatgtcaacttcaaggacatgggctgggacgactggattatcgcgcccctg
gagtacgaggccttccactgcgaggggctatgcgagttccccctgcgctcccacctggag
cccacgaaccatgcagtcatccagaccctgatgaactccatggaccctgagtccacgcca
cccacctgctgtgtgcccacgcggctgagtcccatcagcatcctcttcattgattccgcc
aacaacgtggtctataagcagtatgaagacatggtcgtggagtcttgtggctgcaggtag
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