Phocoena sinus (vaquita): 116740655
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Entry
116740655 CDS
T07759
Symbol
ARHGEF16
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116740655 (ARHGEF16)
Membrane trafficking [BR:
psiu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116740655 (ARHGEF16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SOS1_NGEF_PH
PH
SH3_9
SH3_2
RHG20_PH
IQ_SEC7_PH
ECT2_PH
SH3_16
Motif
Other DBs
NCBI-GeneID:
116740655
NCBI-ProteinID:
XP_032462346
Ensembl:
ENSPSNG00000002826
LinkDB
All DBs
Position
1:2023848..2043924
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AA seq
729 aa
AA seq
DB search
MRTPSPHQTGTNSPPLWSPRPLSMSQQHSDSSLEEKLLEYRFHSELHLDTEGNPASGLPM
VRGSLQSRSNAAFQPDAPVPPSPSPEPQELRTIVLSTQSPAALKMGTQQLIPRSLAVSSK
AKTPARHQSFGAATLSKEAARRDPRLLPAPSFSLDDMDTGPGGLLRRNLRNQSYRAAMKG
LGTPGGEGGPVQLSPKIPALAEEPSQPPARSTAKNKKTLGRKRAHKGSFKDDPRFYQEIR
ERGLNTIHESDDDLLDESSSPEETQKVDARIVVKSYRPPQVTWSQLPEVVESGILDKLPA
EEHERQEAIFEILTSEFSYQHSLGILVAEFLQSRELRATMTQTEHHHLFSNITDVLSASQ
RFFEDLEKRHRAQVCVEDVSDILEEHAERHFHPYVSYCSNEVYQQRALQQLTSSSAAFRE
ALREIEQRPACGGLPMISFLILPMQRVTRLPLLTDTLCLKTQGHPERYKAASRALKAISK
LVKQCNEGAHRMERMEQMYTLHTQLDFSRVKSLPLISASRWLLKRGELFMVEETGLFRKL
SSRPTCYLFLFNDVLVVTKKKSEDSFVVQDYAQLDHIQVQKMEPSEASLPGGGNRSSFVP
HAFQLTLLHNSEGRQEKILLSSDSASDRARWITALTRWERQQQDPTNKGDLLQVEITKAY
LAKQADEITLQQADVVLVLEQEDGWFYGERLRDGETGWFPEDLARSITSRVAVEGNMRRM
ERLRVETDV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccccctccccacatcaaactggaacaaactctcccccactctggtcaccgcgg
ccactcagcatgtcccagcagcactcggacagctccttggaggagaagctcctggaatac
cgcttccactcagagctgcatctcgacaccgagggaaacccagcgtccgggctcccgatg
gtccggggctccctgcaaagcaggagcaatgccgccttccagcccgatgccccggtgccc
ccgtcgccgtcccctgagccccaggagctcaggaccattgtcctgagcacgcagagcccg
gcagccctcaagatgggcactcagcagctgatcccccggagcctggctgtgtccagcaag
gctaagaccccggcccgccatcagagctttggggcggccacgctcagcaaagaggctgcc
cggcgggacccccggctcctcccggcccccagcttctccctggatgacatggacacgggt
cctggggggctgctgagacgaaatctgaggaaccaatcctaccgggcggccatgaagggg
ctggggacccccggcggcgagggcggccccgtccagctcagccccaagatcccggctctg
gccgaggagcccagccagcctcctgctcggtccacggccaaaaataagaagacgctgggg
cggaaacgtgcacacaagggctccttcaaggacgatccccggttctaccaggagatccgg
gagcgaggcctgaacaccatccacgagtccgacgatgacttactcgatgaatcctccagc
cctgaggaaacccaaaaggtggatgcccgcatcgtggtcaagagctaccggcccccccag
gtcacctggagccagctcccagaggtggtggagtcgggcatcctggacaagctgcccgcc
gaggagcacgagaggcaggaggccatcttcgagatcctcacatccgagttctcgtaccag
cacagcctcggcatcctggtggccgagttcctgcagtcccgggagctgcgggcgaccatg
acccagacagagcaccaccacctcttctccaacatcacggacgtgctgagcgccagccag
aggttcttcgaggacctggagaagcggcacagggcgcaggtgtgcgtggaggacgtcagt
gacatcctggaggagcacgccgagcggcacttccacccctacgtctcctactgctccaac
gaggtctaccagcagcgcgccctgcagcagctgacgagcagcagcgctgccttccgagag
gccctgagggagatcgagcaacggcccgcgtgcgggggtctgcccatgatctccttcctg
atcctgcccatgcagagggtgacccggctgcccctcctgacggacacactctgcctcaag
actcagggccaccccgagagatacaaggccgccagccgtgcactcaaggccatcagcaag
ctggtgaagcagtgcaacgagggggcccaccggatggagcgcatggagcagatgtacacg
ctgcacacacaactggacttcagtagggtcaagtccctcccactgatctctgcttcccgc
tggctgctgaagcgcggggagctcttcatggtggaagaaaccgggcttttcagaaaactc
tctagccgaccgacatgctacctgttcctgttcaacgacgtcctcgtggtcaccaagaag
aagagtgaggacagcttcgtggtccaggactacgcccagctggaccacatccaggtccag
aagatggagccctcggaggcctctctgccagggggcggcaaccgcagctcctttgtacca
cacgccttccagctgaccctgctgcacaacagtgagggccgccaggagaagatcctgcta
tcctccgactcagcgagtgaccgcgcgcggtggatcacagcactcacgcgctgggagagg
cagcagcaagaccccactaacaaaggagacctgctccaggtggagatcaccaaggcttac
ttggccaagcaggcggatgagatcacactgcagcaggcagatgtggtcctggtcctggag
caagaggacggatggttctatggcgagaggctgcgggatggagagacgggctggttccct
gaggacttagcccggagcatcaccagccgcgtggccgtggagggcaacatgcgcaggatg
gagcggctgcgggtggagacggacgtgtag
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