Phocoena sinus (vaquita): 116740719
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Entry
116740719 CDS
T07759
Symbol
SRRM2
Name
(RefSeq) serine/arginine repetitive matrix protein 2 isoform X1
KO
K13172
serine/arginine repetitive matrix protein 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116740719 (SRRM2)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
116740719 (SRRM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cwf21
CTD
Motif
Other DBs
NCBI-GeneID:
116740719
NCBI-ProteinID:
XP_032462471
Ensembl:
ENSPSNG00000018836
LinkDB
All DBs
Position
15:complement(51946880..51965261)
Genome browser
AA seq
2743 aa
AA seq
DB search
MYNGIGLPTPRGSGTNGYVQRNLSLVRGRRGERPDYKGEEELRRLEAALVKRPNPDILDH
ERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKDVNPGGKEETPGQRPVVTE
THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPVPEPPKPYSLVRESSSS
RSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKS
KDKKRKRSRSTTPAPKSRRVHRSTSADSASSSDTSRSRSRSAAAKTHTTTLTGRSPSPAS
GRRGEGDVPSREPGITNIGQPSSPEPSTKQPSSPYEDKDKDKKEKSAVQPSPSPERSSTG
PELPAPTLLLAEQYGGSPQPLATTPLSQEPVNPPSEASPAQGHSPPKSPEKPPQSSSESG
PPSPQPTKVSRHASSSPESPKPTPAPGSRRDISSSPASKSRSHGRTKRDKSHSHTPSHRV
GRSRSPTTKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGW
SRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPTRRGRSRSRTPARRRSRSRTPTRR
RSRSRTPVRRGRSRSRTPARRRSRTRSPVRRRSRSRSLARRSGRSRSRTPARRGRSRSRT
PARRGRSRSRTPARRSGRSRSRTPTRRGRSQSRTPARRGRSRSRSLVRRGRSHSRTPQRR
GRSGSSSERKNKSRASQRRSRSNSSPEMKKSRVSSRRSRSLSSPRSKVKSRLSVRRSLSG
SSPRPKQKSQTPPRRSRSGSSQPKAKSRTPLRRSRSGSSPPPNQKSKMPSRQSHSSSSPQ
PNVKSGTPRQESVTSPQVNEQSATPQRQSRSESSPDPEVKSRTPSRHSCSGSSPPRVKSS
TPPRRSRSGSSSPQPKMKAVTSPIQSHSGFSSPSPSRVTSKTPSRQSRSESPCSKTESRS
LQRHSHSRSSSPDTKVKPGTPPRQSHSGSTSPCPKAKPQTPPGHNLPGSKSPCSEEKSKD
ISAQSCSGSFSLCPGVKSCTPPSALQQKGQSPTSPDSTSGTSSPEMRQSHSESPYLQTKS
QTPPKGGQSRSSSPITELAPRSPTRQDRSELSEGLRLKSGMSPEQSGSHSDSSLYPAVDS
KSLLGQSTLEPSESKEKMSLLLQEDVTASSPKPRDKLSPPSVQDRPESSPVLRDTPRTPS
RERGGVESSPDTKDRSSALTKPSQDEELMEVVEKSEESLNQVLPHLSPELKEMAGSNFES
SPEIEERSAMSLTLDQSQSQASLEEVPAVASAWSGPHFSPEHKELSDSPPRENSFGSPLE
FRNSGPLAEMNTGFSPEIKDLNGPFPNQLETDPSLDVKEQSTRSSRHSSSELSPDAVEKA
GMSSNQSVSSPVLDAIPRTPSRERSSSASSEMKDGLPRTPSRRSRSGSSPGLRDGSGTPS
RHSLSGSSPGMKDIPRTPSRGRSECDSSPEAKALPQTPRPRSHSPSSPELNNKCLTPQRE
RSGSESSIEQKTVTSTPLGQRRRSGSSQELDGKPSSSPQERSESDSSPDSKAKTRMPLRQ
MSHSGSSPEVDSKSRPSPRRSRSGSSPEVKDKPRAVPRAQSGSDSSPEPKAPVPRVLPRR
SRSGSSSKGRGPSPEGSSSSESSPEHPPKSRTTRRSSRSSPEPKTKSRTPPRRRSSRSSP
ELTRKARLSRRSRSASSSPETRSRTPPRRRRSPSVSSPEPAEKSRSSRRRRSASSPRTKT
TSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRR
GGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRR
SRSRTPLVSRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRS
RSRTPTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRS
RTSPVTRRRSRSRTSPVTRRRSRSRTPLALRRRSRSRTPLLARKRSRSRSPLAIRRRSRS
RTPRTTRGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSC
FSRPSMSPTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPDHPRTSVPENH
AQSRIALALTAISLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAASLASRIPAAS
AAAMNLASARAPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVN
LAGARTPAALAALSLTGSGTAPTAANYPSSSRTPQAPAPANLVGPRSTHATAPVNIASSR
TPPALAPANLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPGGPGS
RTPPSAPSQSRMTSERAPSPASRMVQASSQSVLPPAQDRPRSPVPSAFSDQSRSLLAQTT
PVAGSQSLSSGTVAKTTSSAGDHDGMLSGPVPGVFHPEGGEPTASMEAQQPSALAALQPA
KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPTQPEVVLKRVPSPAPAPK
EAVREGRPQEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSS
PSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPAERRRPSPQPSPR
DQQSSSERGSRRSQRGDSHSPGHKRRRETPSPRSVRHRSSRSP
NT seq
8232 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacgggatcgggctgccgacgccccggggcagcggcaccaacggctacgtccag
cgcaacctgtccctggtgcggggccgccgcggtgagcggcctgactacaagggagaggag
gaactgcggcgcctggaggctgccctggtgaagcggcctaatcctgacatcctggaccac
gagcgcaagcggcgcgtggagctgcgatgcctcgagctggaggagatgatggaagagcag
gggtacgaggaacagcagattcaggaaaaagtggcgacctttcgactcatgttgctggag
aaggatgtgaaccctgggggcaaggaggagaccccagggcagaggccagtggtaactgag
actcaccagttggcagaattgaatgagaagaagaacgagcgactccgagctgcctttggc
atcagtgattcctatgtggatggcagctcttttgatcctcagcgtcgtgctcgagaagct
aaacaaccagttcctgagccacccaaaccttacagccttgtccgggagtctagcagttct
cgctcaccaaccccaaagcaaaagaagaagaaaaagaagaaagatagaggacgcaggtca
gagagcagctctccccgacgagagaggaagaagagctctaagaagaagaagcacaggtca
gaatctgaatccaagaaaaggaagcataggtctcctactccaaagagcaaacgtaaatct
aaggacaagaagcggaagcggtctcgaagtacaacaccagcccccaagagccgacgcgtg
caccgttcaacttctgcagactctgcttcctcttcagatacttcccgcagtcggtctcga
agtgctgcagctaaaacccatactactaccttgactgggcgaagtccttcccctgcttcg
ggacgtcgaggggagggagatgtaccatccagggaaccaggtatcaccaacatagggcag
cctagtagcccggagccttctacaaagcagcctagcagcccttatgaagacaaagataaa
gacaagaaggagaaatctgcagttcaacctagcccctctccggaaaggagcagcacaggg
ccagaactacctgctcccactctgctccttgctgagcaatatggcggctccccacaaccc
cttgcaacaacccccttaagtcaggagccagtgaaccccccttctgaggcgtctccagcc
cagggccattcaccacctaagtctcctgagaaacctccccaatcttcttcagagagtggc
ccgccctcccctcaacctaccaaagtttctcggcatgccagctcttcccctgaaagtcct
aaacctacaccagctcctgggtcccgccgagatatttcttcttctcctgcatccaagagt
cgctcacatggccgaacaaaacgggataagtcacattctcatactccttctcatagagtg
gggaggtcccgtagtcctaccactaagagggggcggtctcggtctcgaacccctaccaag
agaggtcattctcggtcccggtcacctcagtggcgtaggtcccggtctgcacagaggtgg
ggacgatctaggagcccccagcgacgtggccgctctaggtctcctcagcgaccaggctgg
tccaggagcagaaatacacagagaagaggcaggtctaggtcagcaagacgaggcaggtca
cactctagatcccctgcaactaggggcagatctcgttctagaacacccacccggaggggc
agatctcggtctaggacacctgccaggcggaggtcacgatctagaacacccactaggcgc
aggtctcggtctagaacaccagtccggaggggcaggtctcggtctagaacacctgctagg
cgcagatctaggacccgatcaccagtacgacggaggtctcgtagtagatcgctagccagg
agaagtggcaggtcacgctctaggaccccagccaggcgtgggcggtcacgctccagaacc
ccagccaggcgtgggcggtcgcgctccagaaccccagctagacgaagtggccggtcacgc
tctagaacaccaacccggagagggagatctcagtctaggacaccagcaagacgaggaaga
tcccgtagtagaagtctagttagacggggaagatctcactctagaacaccacaaagaagg
ggcaggtctggctcatcatcagagcggaagaacaaatccagagcatcacagagaaggagc
aggtccaactcaagcccagaaatgaagaaatctcgagtttcttcgaggcggagcaggtct
ctctcttcaccaaggtctaaagtaaaatcccgcttgtctgtgaggcgaagcctttcaggg
tcctctccacgccctaaacaaaagtctcagacaccaccaaggcgcagtcgctccggatca
tcccaaccaaaagctaaatctagaacaccactaaggcgaagtcgctctggttcttctccg
cctcctaatcagaaatctaaaatgccatcaagacaaagtcattccagttcatctcctcaa
cctaacgtgaaatctggaacaccaaggcaagagtctgtaacaagtccccaggtaaatgaa
caatctgcaacaccacaaaggcagagccgttctgaatcatcacctgatcctgaggtgaag
tctaggaccccttcgagacatagctgctctgggtcttctcctcctagagtgaaatctagc
acacctccaagacggagccgatctgggtcatcatctccacaacccaaaatgaaagcagta
acgtcaccaatccaaagccattctggcttctcttctccaagtcctagtagagtgacatct
aaaacaccttcaaggcaaagcagatcagagtctccatgctccaagacagaatctagatcg
ttgcaaagacacagccattctagatcctcctctccagataccaaagtgaaacctggaaca
ccaccaagacagagtcactcagggtctacttcgccgtgccccaaagcaaagccccaaact
ccaccagggcataatcttcctggatcaaagtcaccatgttccgaagagaagtctaaagat
atatcagcacagagttgctctggatctttctccctctgtccaggagtaaagtcctgcaca
ccaccctcagctctgcaacagaaaggacaatctccaacttcaccagactccacatctggt
acttcaagtccagaaatgagacagagtcattctgaatctccatatctgcagaccaaatct
cagacacctcctaagggtggccagtccaggtcctcatctccaatcactgagctggcaccc
agatctccaacaagacaagatagaagtgaattgtcagaaggtcttaggctgaaatctgga
atgtctcctgagcagagcgggtcacattctgactcttccctatatcctgcagtggactct
aaatctcttctggggcagagtacattggagccttctgaatcaaaagaaaaaatgagctta
ctccttcaggaggatgttactgcatcatctccaaaaccaagagacaaattgagtcctcct
tctgtgcaggataggcctgagtcctcaccagtactcagagacacccctagaactccatca
agggaaagaggtggtgttgagtcatctccagatacaaaagaccgaagtagtgcattaact
aagccaagccaagatgaggaattaatggaggtggtagagaaatctgaagaatccttaaac
caggtcctgccccatttgtctccagaacttaaagaaatggctggaagtaactttgaatca
tctcctgaaatagaagaaagatctgccatgtctttgactcttgaccaaagccagtcacag
gcttctttggaagaagtccctgcagtggcctcagcttggagtgggccacacttttctcca
gaacataaagaactgtctgactctcctcccagagagaatagctttggatcacctttagaa
tttagaaactctggccctcttgcagaaatgaatactggattttctcctgagattaaagat
ttgaatggaccttttcctaatcagctggagacagatccatctctagatgtgaaagaacaa
tcaacaaggtcctccagacacagcagttctgagttatccccagatgcggtggaaaaagca
ggaatgtcttcaaatcagagtgtctcttcgccagtacttgatgctatacctagaacaccc
tccagggaaagaagtagttctgcatcttctgaaatgaaggatggtttacccagaaccccc
tcaaggagaagcaggtctgggtcttccccaggacttagagatgggtctgggactccctca
aggcacagcctatctgggtcgtctcctggaatgaaagatatacctagaacaccatccagg
ggaaggagtgaatgtgattcctctccagaagcaaaagctttgcctcagactcctaggcca
aggagtcattctccatcatccccagagctcaacaataagtgtcttaccccccagagagaa
agaagtgggtcagagtcatcaattgaacagaagactgtgactagtactcctctcggccag
agacgtcggtctggatcttctcaagaacttgatgggaaacccagttcatcgcctcaggag
agaagtgagtcagactcttctccagattctaaagctaagacacgaatgccacttagacaa
atgagtcactctggatcatctccagaggtcgacagcaaatcccggccttctcctcggcgt
agtaggtctggctcatctcctgaagttaaagataagccaagagcagtacccagggcacag
agtggttctgattcctctcctgaacccaaggctcctgtccctcgggtccttccaagacga
agcagatcaggttcatcaagcaaaggcagaggcccttcgcctgaaggaagcagcagttct
gagtcctctccagaacacccacccaaatccagaactactagaagaagttctaggtcatca
ccagagcccaagaccaagtctcgtactccccctcgccgtcgcagctctcgatcgtctcct
gagctgactaggaaggccaggctctcccgtagaagccgttctgcatcatcctcaccagag
acccgctctagaactcccccaagacgccgaagaagtccctcagtgtcttccccagagcca
gcagaaaagtcaagatcctcacgccggcggcgttcagcttcatctccacgcactaagaca
acttcaaggagaggccgttctccttcaccaaagcctcgtgggctgcagaggtcccgttcc
cgctcgaggagggagaaaaccagaacaacccgtcgtcgagataggtctggatcttctcag
tcaacctctcggagaagacagcggagccggtcaaggtctcgggttactcggcgtcgcagg
ggaggctccggttaccattcaaggtctcctgcccggcaggagagttccagaacctcctct
agacgccgaagaggccgctctcggacacccccaaccagtcggaagcgttcccgctcacgc
acatcaccagccccatggaaacgctccaggtctcgggcctctccagccactcatcggcga
tccaggtccagaacacccctggttagccgacggaggtccaggtctcgaacttcaccagtc
agccggaggcgatcaaggtccaggacatcagtgactagacgaagatctcgatcaagagct
tccccagtgagtcgaaggcgatctaggtccagaacaccaccagtaacccgccgtcgttca
aggtctagaacaccaactcgccgacgctcccgttctaggactccaccagtgactcggaga
aggtccagatctaggaccccaccagtaaccagaaggcgatctcgaagcagaacctcccct
atcactcgcagaagatcaagatccagaacatccccggtcacccgaaggaggtcaagatct
cgcacgtctccggtaactcgaaggaggtctcgctctcgaacctctccagtgacacgccgc
cgatctaggtcccgaactcctctagctcttcggcgccgctctaggtctcggaccccattg
ttagcacgcaagcgttctcgaagtcgctcaccacttgctattcgccgccgttctaggtcc
cgtactccacgaacaactcggggcaaacggtccttaacaagatctcctccagctatccgc
aggcgttctgcgtccggaagcagttctgatcgttcacgttctgctactcctccagcaaca
agaaatcattctggttctcggacacctccagtagcgctcaatagctccagaatgagctgc
ttcagtcgtcctagcatgtcaccaactcctcttgaccgctgtagatcacctggaatgctt
gagcccctaggcagctctagaacacccatgtctgtcctgcagcaagctggtggttccatg
atggatggtccaggtccccgaattcctgaccacccgagaacgtctgtgccagaaaaccat
gctcagtctagaattgcacttgccctgacggctatcagtcttggcaccgctcggcctcct
ccgtccatgtctgcagctggccttgctgcaagaatgtcccaggttccagctccagtgcct
ctcatgagtctcagaacagccccagctgccagccttgccagcaggattcctgcagcctct
gcagcagccatgaacctggccagcgccagggcacctgccatcccaacagcagtaaacctg
gctgactcaagaacgccagctgcagcagcagccatgaacttggccagccccagaacagca
gtggcaccttcggccgtgaaccttgctgaccctcgtacccccacagcgccagctgtgaac
ctggcaggagccagaaccccagctgctttggcagctttgagtctcacgggttctggcaca
gccccgactgctgcaaactatccgtccagctccagaacaccgcaggctccagcccctgca
aacctggtgggtcctagatctacacatgccacagctcctgtgaatattgccagctcaaga
acccctccagccttggcccctgcaaatctcactagtgctagaatggctccagccttgtct
ggtgcaaacctcaccagccctagggtgcccctctctgcctatgagcgcgttagtggcaga
acctcaccaccactccttgaccgagccaggtccagaaccccaccaggaggcccaggctcc
agaaccccaccatctgccccaagccagtctagaatgacatctgagcgggctccctctcct
gcctctagaatggtacaggcttcctcacagtcagttcttcctccagctcaggatcggcct
aggtcccctgtgccatctgctttttctgaccagtcccgatctttgcttgcccagaccacc
cctgtagcagggtctcagtccctttcctctggaacggtggcaaagaccacatcctctgct
ggtgaccacgatggcatgctctctggccccgtccctggggtgttccacccagagggtggg
gaaccaactgcctctatggaggcccagcagccttctgctttggctgccctgcagccagca
aaggagcggcggagttcgtcctcctcctcctcctctagctcttcctcttcatcgtcgtcg
tcatcatcgtcgtcctcctcctcctctggctccagttctagcgactcggagggctctagc
cttcccactcaacctgaggtagtactgaagagggtccccagccccgccccagccccaaag
gaggctgttcgagagggccgtcctcaggaaccgaccccagccaagcggaagaggcgttct
agcagctccagttccagcagcagctcctcctcttcatcgtcttcttcttcctcttcttcc
tcctcctcctcctcctcttcctcttcttcgtcttcctcttcttcctctacttcttcctcc
ccctcccctgctaagcctggccctcaggccttgcccaaacctgcaagccccaagaagcca
ccccctggcgagcggaggtcccgcagcccccggaagccaatagactccctccgggactcc
cggtccctcagctactcgcctgcggagcgccgccgcccctcaccccagccctcaccgcgg
gaccagcagagcagcagtgaacggggttcccggagaagccagcgtggggacagccactcc
ccaggccacaagcgcaggagggaaacgcccagcccccgctctgtgcggcaccgttcctcc
aggtctccgtga
DBGET
integrated database retrieval system
