Phocoena sinus (vaquita): 116740763
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Entry
116740763 CDS
T07759
Symbol
PAX1
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116740763 (PAX1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116740763 (PAX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
Motif
Other DBs
NCBI-GeneID:
116740763
NCBI-ProteinID:
XP_032462559
Ensembl:
ENSPSNG00000004773
UniProt:
A0A8C9B6S4
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All DBs
Position
15:complement(45676432..45685037)
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AA seq
449 aa
AA seq
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MKFTLGLGSRAWRVSWERAAAAAAGGGALGSGSRRSSSPRPGRRGSRLARALPLCLSRGG
GAPALPDRAGPSPGRLGARQPAGPRAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQ
LGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGD
PGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKIGSLAQPGPYEASKQPPPQPALPY
NHIYQYPYPSPVSPTGAKMGSHHGVPGTAGHVSIPRSWPSAHSVSNILGIRTFMEQTGAL
GGSEGAAYSPKMEDWAGVNRTAFPASPAVNGLEKPALEADIKYTQSASGLPAVGGFLPAC
AYPASNQHGVYSSPAGGYLAPGPPWPPAQGPPLAPPGAGVTVHGGELAAAVTFKHPSREV
ADRKPPSPGGKAPDGLGSLHGLPAPASTS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccctaggcctggggtcgcgggcgtggagagtgtcctgggagcgggcggcg
gcggcggcggcgggcggcggcgcgctcggcagcggctcacggcgctcttccagcccgcgg
cccggccgccgcggctctcggctcgcgcgcgccctccctctatgcctctcccgcggcggc
ggcgccccagctctcccggaccgcgccgggcccagccccggccgcctcggcgccaggcag
ccggccggcccgcgcgccatggagcagacgtacggcgaggtgaaccagctgggcggcgtg
ttcgtcaacggccgccccctgcccaacgccatccgcctgcgcatcgtggagctggcgcag
ctgggcatccgaccctgtgacatcagccggcagcttcgcgtatcccacggctgcgtgagc
aagatcctggcgcgctacaacgagacgggctccatcctgcccggggccattgggggcagc
aaaccccgcgtcactacccccaacgtggtcaagcacatccgggactacaagcagggcgac
cccggcatctttgcctgggagatccgcgaccggctgctagccgacggcgtctgcgacaag
tacaacgtgccctctgtgagttccatcagccgcatcctgcgcaataagattggcagcctg
gcgcagcccggcccgtacgaggcgagcaagcagccgccgccgcagccggcgctgccctat
aaccacatctaccagtatccctaccccagccccgtgtcgcccacgggcgccaagatgggc
agccaccacggggtcccgggcacagcgggccacgtcagcatcccccgttcatggccctcg
gctcactcggtcagcaatatcctgggcatccggacgtttatggagcaaacaggggccctg
ggggggagcgaaggcgccgcctactccccgaagatggaagactgggccggcgtgaaccgc
acggccttccccgccagcccagccgtgaacgggctcgagaaacctgccttggaggcagac
attaaatacacgcagtcggcctccggcctccccgcggtgggcggcttcctcccggcctgc
gcctacccggcctccaaccagcacggtgtgtacagctcgccggccggcggctacctcgcc
ccgggcccgccgtggccgccggcgcaagggcccccgctggcgccccccggggccggcgtc
accgtacacggcggggagcttgccgcagccgtgaccttcaagcatcccagccgagaagtg
gccgaccggaagccgcccagccccggcggcaaggcccccgacggcctcgggagcttacac
ggactgcccgctccggcctcgacctcctag
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