Phocoena sinus (vaquita): 116740809
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Entry
116740809 CDS
T07759
Symbol
RPN2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00510
N-Glycan biosynthesis
psiu00513
Various types of N-glycan biosynthesis
psiu01100
Metabolic pathways
psiu04141
Protein processing in endoplasmic reticulum
Module
psiu_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
116740809 (RPN2)
00513 Various types of N-glycan biosynthesis
116740809 (RPN2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116740809 (RPN2)
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GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
HSM3_N
DUF5859
Motif
Other DBs
NCBI-GeneID:
116740809
NCBI-ProteinID:
XP_032462644
Ensembl:
ENSPSNG00000006474
UniProt:
A0A8C9BL01
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Position
15:complement(22379430..22434923)
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AA seq
670 aa
AA seq
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MAPPGSSTVFLLALTIIASVHALTPTHYLTRHDVERLKASLDRPFTSLESAFYSIVGLSS
LRAQVPDVKQACTFIKSNLDPSNVDSLFYAAQSSQALSGCEISISNETKDLLLAAVSEDS
SMAQIYHAVAALSGFGLPLASQEVLGALTSRLSKEETVLATVQALQTASYLSQQADLRSI
VEEIEDLVARLDELGGVYLQFEEGLETTALFLAATYKLMDHVGTEPSIKEDQVIQLMNAI
FSKKNFESLSEAFSVASAAAALSQNRFHVPVVVVPEGSASYTQEQAILQLQVTNVLSQPL
TQATVKLEHAKSVASRATVLQKTSFTPVGDVFELNFVNVKFSSGYYDFSVKVEGDNRYIA
NTVELRVKISTEVGITNVDLSTVDKDQSIAPKTTRVTYPAKAKGTFIADSHQNFALFFQL
VDVNTGAELTPHQTFVRLHNQKTGQEVVFVAEPDSKNVYKFELDTSERKLEFDSASGTYT
LYLIIGDATLKNPILWNVADVVIRFPEEDAPSTVLSKNLFTPKQEIQHLFREPEKRPPTV
VSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAAMLGLMYVYWTQLNMF
QTLKYLAILGSVTFLAGNRMLAQQAIKRKPFSALLPHPRGGLFCNHHSLPELFLLKQHIS
SRKKKEILKA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgggttcaagcactgtcttcctgttggccctgacaatcatagccagcgtc
catgctctgacgcccactcactacctcactaggcatgatgtggagagactgaaagcctcg
ctggatcgccctttcacaagtttggaatctgctttctactccatcgtgggactcagcagc
cttcgtgcccaggtgccagatgtaaagcaagcatgcaccttcattaaatcaaaccttgat
ccaagcaacgtggattcccttttctatgctgcccagtccagccaggccctctcagggtgt
gagatctctatttcaaatgagaccaaagatctgcttctggcagctgtcagtgaagactcc
tccatggcccagatctaccacgcagttgcagccctaagtggctttggccttcctctggct
tcccaagaagtgctcggtgcccttacctctcgcctcagcaaggaggagaccgtgcttgca
acagtccaggctctacagacggcatcctacctgtcccagcaggctgacctgagaagcatc
gtggaggagattgaggaccttgttgctcgcctggatgaactgggaggtgtgtatcttcag
tttgaagagggactggaaacaacggcattgtttttggctgccacctacaagctcatggac
catgtgggcaccgagccatccattaaggaggatcaggtcatccagctaatgaatgccatc
ttcagcaagaagaactttgagtcactctcagaagccttcagtgtggcctctgctgccgct
gcactctcccagaatcgcttccatgtacctgttgtggttgtgcctgagggctctgcttcc
tacactcaggaacaggctatcctacagttgcaggtcaccaatgttctgtctcagcctctg
actcaggccactgttaaactagaacacgctaaatccgttgcctccagagccacagtcctc
cagaagacatcgttcacccctgtgggggatgtttttgagctaaactttgtgaatgtcaaa
ttttccagtggctattatgacttctctgtcaaagttgaaggtgacaaccgttatattgca
aatactgtagagctcagagtcaagatttccactgaagttggcatcacaaatgtcgatctc
tccactgtggataaggatcagagcattgcacccaaaaccacgcgggtgacctacccagcc
aaagccaagggcacattcatcgcagacagccaccagaactttgctttattcttccagctg
gtagatgtgaacactggtgctgaactcacccctcaccagacatttgtccgactccataac
cagaagactggccaggaggtggtatttgttgcggagccggacagcaagaacgtgtacaag
tttgaactggatacctctgagagaaagctcgaatttgactctgcgtccggcacctacact
ctctacctgatcatcggagatgctactttgaagaacccaatcctgtggaatgtggctgat
gtggtcatcagattccctgaagaagatgctccgtcgactgtcctgtccaagaaccttttc
acccccaaacaggaaattcagcacctgttccgcgagccggagaagaggccccccacggtg
gtgtccaatacattcaccgccctgatcctctcgcccttgctcctgctctttgctctgtgg
atccggattggtgccaatgtctccaacttcacttttgctcctagcacgattatctttcac
ctgggacatgctgctatgctggggctcatgtatgtctactggacgcaactcaacatgttc
cagaccctgaagtacctggccatcttgggcagtgtgacgtttctggctggcaatcgcatg
ctggcccagcaagcaatcaagagaaaacccttttctgccctcctcccgcacccccgagga
ggactcttctgtaaccaccacagcctcccggagctcttcctcctaaaacagcacattagt
tccaggaaaaagaaggagattctgaaagcttaa
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