Phocoena sinus (vaquita): 116740833
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Entry
116740833 CDS
T07759
Symbol
APH1A
Name
(RefSeq) gamma-secretase subunit APH-1A
KO
K06172
gamma-secretase subunit APH-1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04330
Notch signaling pathway
psiu05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116740833 (APH1A)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116740833 (APH1A)
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Motif
Pfam:
Aph-1
Peptidase_M3_N
Motif
Other DBs
NCBI-GeneID:
116740833
NCBI-ProteinID:
XP_032462712
Ensembl:
ENSPSNG00000001681
UniProt:
A0A8C9BDN2
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Position
1:complement(109800349..109803992)
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AA seq
340 aa
AA seq
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MGTRQGFVPSSASVEEVVPTCIWGFGVPAFPGVRGDIAPRPSRGRVATPRGLPGWRASSL
RLSWPGPHLAPSSAAMGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVS
LLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLS
EDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTA
AIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMG
LWAFITAGGSFRSIQRSLSCRRQEDSRVMVYSALRIPPED
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcggcaggggtttgtcccctcctcggcttccgtagaggaagtcgtgccgacc
tgtatctggggtttcggtgtccccgccttcccgggggtccggggtgacattgcaccgcgc
ccctcacggggtcgcgtcgccaccccacgcggactccctggctggcgtgcttcatccctt
cgcctctcttggccgggcccccacctcgcccccagcagcgcagccatgggggccgcagtg
tttttcggatgcactttcgtcgctttcggcccggcctttgcgcttttcttgatcactgtg
gcaggagacccgcttcgcgtcatcatcttggtcgccggggcatttttctggctggtctcc
ctgctcttggcctctgtggtctggttcatcttggtccatgtgaccgaccggtcggatgcc
cgactccagtatggcctcctgatttttggtgctgcagtctctgtccttctacaggaggtg
ttccgctttgcctactacaagctgcttaagaaggcagatgaggggttagcatcgctgagt
gaggacggaagatcacccatctccatccgccagatggcctatgtttctggtctttccttc
ggtatcatcagtggtgtcttctctgttatcaatatcttggccgatgctcttgggccaggt
gtggttgggatccatggagattcaccctattacttcttgacttcagcctttctgacagca
gccattatcctgctccataccttttggggagttgtgttctttgatgcctgtgagaggaga
cggtactgggctttgggcctggtggttgggagtcacctactgacatcgggactgacattc
ctgaacccctggtacgaggccagcctgctgcccatctatgcagtcactgtttccatgggg
ctctgggccttcatcacagctggagggtccttccgaagtatccagcgcagtctctcgtgc
cgacggcaggaggacagtcgggtgatggtgtattctgccctgcgcatcccacccgaggac
tga
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