Phocoena sinus (vaquita): 116740854
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Entry
116740854 CDS
T07759
Symbol
SOX12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116740854 (SOX12)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116740854 (SOX12)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116740854
NCBI-ProteinID:
XP_032462749
Ensembl:
ENSPSNG00000007737
UniProt:
A0A8C9E1A5
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All DBs
Position
15:27415499..27418713
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AA seq
312 aa
AA seq
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MVQQRGARAKRDGGPPPPGPGPAEEGAREPGWCKTPSGHIKRPMNAFMVWSQHERRKIMD
QWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPA
KARPRPPGGGGSRLKPGSQLPSRGGRRAAGGPLGGGAAAPEDEDEDDDEELLEVRLVETP
GRELWRMVPAGRAARGQAERSQGPSGEGAAVTAASPTPSEDEEPEEEEEEAAATEEGEEE
TVASGEEPLGFLSRLPPGPAGLDCSALDRDPDLPPASGTSHFEFPDYCTPEVTEMIAGDW
RPSSIADLVFTY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcagaggggcgcgagggccaagcgggacggcgggccgccgcccccggggccc
gggccggccgaggagggggcgcgtgagcccggctggtgcaagaccccgagcggccacatt
aagagaccgatgaacgcgttcatggtgtggtcgcagcacgaacggcggaagatcatggac
cagtggcccgacatgcacaacgccgagatctccaagcgcctgggccgccgctggcagctg
ctgcaggactcggagaagatcccgttcgtgcgggaggcggagcggctgcgcctcaagcac
atggcggattacccggactacaagtaccggccgcgcaaaaagagcaagggggcgcccgcc
aaggcgcggccccgcccccccggcggcggcggcagccggctcaagcccgggtcgcagctg
cctagccgcgggggccgccgagcggctggagggcctttggggggcggcgcggcggcgccc
gaggacgaagacgaggacgacgacgaggagctgctggaagtacgcctggtcgagacccct
gggcgggagctgtggaggatggtcccggcggggcgggccgcccggggacaagcggagcgt
tcccaggggccgtcgggcgagggagcggctgtcaccgccgcctccccgactccgtcggag
gacgaggagccggaggaagaggaggaggaggcggcggcgacggaggaaggcgaagaggag
acggtggcgtcgggggaggagccgctgggctttctgtccagactgccccccggtcctgcc
ggcctggactgcagcgccctggaccgcgacccagacctgcctcccgcctcgggcacgtcg
cacttcgagttcccggactactgcacccccgaggttaccgagatgatcgcaggggactgg
cgcccgtctagcatcgccgacctggttttcacctactga
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