Phocoena sinus (vaquita): 116740897
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Entry
116740897 CDS
T07759
Symbol
EBF4
Name
(RefSeq) transcription factor COE4 isoform X1
KO
K09103
early B-cell factor
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116740897 (EBF4)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
116740897 (EBF4)
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
116740897
NCBI-ProteinID:
XP_032462843
Ensembl:
ENSPSNG00000010517
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All DBs
Position
15:29360930..29416223
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AA seq
602 aa
AA seq
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MFPAQDALPRGGLNLKEEPLLSAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPP
SNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNG
LRTEQDLYVRLIDSVSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSD
PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSK
HGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELIT
PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRH
PGDPERLPKEVLLKRAADLAEALYGVPGGNQELLLKRAADVAEALYSAPRAPAPLGPLAP
SHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCGSASPRGFAPSPGSQQSGYGGGLG
AGLGGYGAPGVAGLGVPASPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFS
FSPVNMISAVKQRSAFAPVLRPPSSPPQACPRAHGEGLPDQPFEDSDKFHSPARRLQGLA
YS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgcgcaggacgctctgccccgcggcgggctgaacctgaaggaggagccgctg
ctgtccgccggcctgggctcggtgcgctcctggatgcagggcgcgggcatcctggacgcc
agcaccgcggcgcagagtggcgtgggcctggcacgagcacattttgagaagcagcccccc
tccaacctcaggaaatccaacttcttccacttcgtgctggccatgtatgaccggcagggg
cagccggtggaggtggagcgtacagctttcatcgactttgtggagaaggaccgagagccc
ggagctgaaaagacaaacaacgggatccattatcgcctccggctggtatataacaacgga
cttcggacagaacaggacctctatgtgcgtctcatcgactccgtgtccaagcaggccatc
atctacgaggggcaggacaagaaccccgaaatgtgccgcgtgctactcacccacgagatc
atgtgcagccggtgctgtgaccggaagagctgtggcaaccggaatgagacaccctcagac
cccgtcatcattgacaggttcttcctcaagttcttcctcaaatgcaaccagaactgccta
aagaatgcggggaatccccgagacatgcgccgcttccaggtggtggtatccacaacggtg
agcgtggatggacacgtgctggccgtgtccgacaacatgtttgtgcacaacaactccaag
catggccgcagggcgcgccgcctggacccctccgaagctgccaccccctgcatcaaggcc
atcagtcctggggagggctggaccacgggcggcgccaccgtcattgtcatcggcgacaac
ttcttcgacgggttgcaggtcgtgtttgggaacgtgctcgtgtggagtgagctcatcacg
ccccacgccatacgggtgcagacgcccccacggcacatccctggggtggtggaggtgacc
ctgtcctacaagtccaagcaattttgcaagggagcccccggccgctttgtctacacagcc
ctgaatgagcccaccattgactacggattccagaggctacagaaagtcattcccagacac
cccggagaccccgagaggctgcccaaggaagtgctgctgaagcgggcggccgacttggcg
gaggccctgtacggagtgcccggcggcaaccaggagctcctcctgaagcgcgcagcagac
gtggccgaggctctgtacagcgccccccgcgcgcccgcgccgctcgggcccctggccccc
agccacccgcaccccgccgtcgtgggcatcaacgccttcagcagcccgctggccattgcc
gtcggggacgccacgccagggccggagccgggctacgcgcgcagctgcggcagtgcgtcc
ccccgcgggttcgcgcccagcccgggctcgcagcagagtggctacggcggcggcctcgga
gctggcctcggcggctacggggcgccgggcgtggccggcctcggtgtgcccgcgtccccc
agcttcctcaatggctccacggccacatcgcccttcgccatcatgccctctagccccccg
ctggccgctgcctcctctatgtccctcccggcggctgcccccaccaccagcgtcttctcc
ttctcgcctgtcaacatgatctccgctgtcaaacagaggagtgctttcgcccccgtgctg
cgcccacccagctccccaccccaggcctgccccagagcccatggagaggggcttccagac
cagccttttgaagattctgacaagttccactctccagctcggaggcttcagggcctggcg
tactcctaa
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