Phocoena sinus (vaquita): 116740916
Help
Entry
116740916 CDS
T07759
Symbol
SPO11
Name
(RefSeq) meiotic recombination protein SPO11 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116740916 (SPO11)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
116740916 (SPO11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
SPO11_like
Motif
Other DBs
NCBI-GeneID:
116740916
NCBI-ProteinID:
XP_032462902
Ensembl:
ENSPSNG00000018975
UniProt:
A0A8C9CV87
LinkDB
All DBs
Position
15:complement(5610657..5624205)
Genome browser
AA seq
395 aa
AA seq
DB search
MAFAPRGPEASFFQVLDQHRASLLVALRKGGREPAGGGTHLATSSEVLAAIENVIQDIIT
SLARNEAPAFTIDNRSSWENIKFEDSVGLHMVSHCTTRKIKSDSPKSVKTFALILKILSM
IYKLVQSNIYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVPRRSLHILSTSKGLIAG
NLRYIEEDGTKVNCACTTAVAVPSNVQGIQNLITDAKFLLIVEKDATFQRLLDDSFCTKM
SPCIMVTGKGVPDLNTRLLVKKLWDTFHIPIFTLVDADPHGIEIMCIYKYGSMAMSFEAH
NLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKQDQMKLDSILKRPYITCQPFWRKEMEIM
ADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgcacccagaggtcctgaggcctcgttcttccaggttttggaccagcacagg
gcttccctgctggtcgccctgaggaaaggcggcagggagcccgctggcggggggacgcac
ctggccactagttctgaggttcttgcagctatagaaaatgttatccaagacataatcaca
agcttggcaagaaatgaagcacctgcattcacaatagacaacagatcaagctgggaaaat
ataaagtttgaagattctgtgggtcttcacatggtatctcattgtaccacaagaaaaatc
aaaagtgattcaccaaaatcagttaaaacttttgcgctaattcttaaaatattgtccatg
atttataaattagtacagagcaacatttacgcaaccaaacgagacatatattacaccgac
agccaactctttggtaaccagactgttgtggacaatattatcaatgatatttcctgtatg
ttaaaagtgccgaggagaagtctgcatatattgtctacatcaaaaggtttaattgctggc
aatttaaggtatatcgaggaagatggcacgaaggtgaactgtgcatgtacaacggctgtt
gctgtgccatctaatgttcaaggaattcagaatttaattacagatgcaaaatttctatta
attgtagaaaaagatgcgacatttcagcggctcctagatgacagtttttgcaccaaaatg
tctccgtgcatcatggttacgggaaagggagtacctgatctgaacacaagacttttagtc
aagaagctgtgggatacatttcacattcctattttcactcttgtagatgctgatccacat
ggcatagaaataatgtgtatctataagtatggatctatggctatgtcttttgaagcccat
aatctcacagttccagctattagatggcttggtctcctcccttctgatatcaaaagatta
aatatacctaaaggtactttaattccactgactaaacaagaccaaatgaaacttgacagt
atcctgaagagaccttatattacttgccaaccattttggagaaaagaaatggaaataatg
gcagactctaaaatgaaggcagaaattcaagctttgaccttcctatcatcagattatctt
tccagagtgtacttacccaacaaattaaaatttggaggatggatataa
DBGET
integrated database retrieval system
