Phocoena sinus (vaquita): 116741011
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Entry
116741011 CDS
T07759
Symbol
MATN4
Name
(RefSeq) matrilin-4 isoform X1
KO
K19467
matrilin
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116741011 (MATN4)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
116741011 (MATN4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
VWA_2
cEGF
EGF_CA
Matrilin_ccoil
DUF1194
hEGF
Motif
Other DBs
NCBI-GeneID:
116741011
NCBI-ProteinID:
XP_032463116
Ensembl:
ENSPSNG00000018933
LinkDB
All DBs
Position
15:15314537..15329369
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AA seq
628 aa
AA seq
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MRGRLCSQLPMFLLLLQPWETQLQFAGPRCRTGPLDLVFVIDSSRSVRPFEFQTMRQFLV
SLLRSLDVGPNATRVGVIQYSSQVQSVFPLGTFSRRKDMERAIRTLVPLAQGTMTGLAIQ
YAMNVAFSVAEGARPPEARVPRVAVIVTDGRPQDRVAEVAAQARSRGIEIYAVGVQRADV
ASLRAMASPPLDEHVFLVESFDRIQEFGLQFQRRLCRKDLCAEGGHGCQHQCVSSPGTFH
CACNPGYRLAADDKSCLALDLCTEGTHGCEHHCVSSPGFYFCRCRAGFVLQQDQRSCRAV
DHCSFGNHSCQHECVSTFGGPRCRCRGGYNLLPDGRSCQAQDLCNGVDHGCEFQCVSEGF
SYRCLCPERWQLQADGKSCSRCQEGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDV
SPEGTRVGLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFS
EAQGARPRALNVPRVGLVFTDGRSQDDVSVWAARAKEEGIVMYAVGVGKAVEDELREIAS
EPAELHVSYSPDFSTMTHLLENLKGSICPEEGISAGTELRSPCECESLVEFQGRTLGALE
SLSQNHILWVQGRGLEGRRDPREPQRLP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagggggcgtctatgctcgcagctgcccatgttcctgctccttctccagccctgggaa
acccagctccagttcgcaggtcccaggtgccgtactgggcccctggatttggtgttcgtg
attgacagctcgcgcagtgtgcgccccttcgagttccagacgatgcggcagttcctggtg
agcctcctccgcagcttggacgtggggcccaacgccacgcgcgtcggcgtgatccagtat
tcgagtcaagtgcagagcgtcttcccgctcggaaccttctcacgccgcaaggatatggag
cgcgccatccgcactctagtgccactggcgcagggcaccatgaccggactggcaatccag
tacgccatgaacgtggccttcagtgtggccgagggcgcgcgcccgccggaggcgcgcgtg
ccgcgcgtcgctgtaatcgtgaccgacgggcggccccaggatcgcgtggccgaagtggcg
gcgcaggcgcgctcccgcggcatcgagatctacgccgtgggggttcagcgcgctgacgtg
gcctccctgcgcgccatggcgtcccccccgctggacgagcacgtcttcctcgtcgagtcc
ttcgaccgtatccaggaatttggccttcagttccagcgccggctgtgtcgaaaggacctg
tgtgccgaggggggacacggctgccagcaccaatgtgtcagctcccccggcacgttccac
tgtgcctgcaaccccggctaccggctagcagcagatgacaagagctgtttggccctcgat
ctgtgcactgaagggacccatggctgtgagcatcactgcgtcagctccccgggcttctat
ttctgtcgctgccgagctggctttgtactccagcaggaccagaggagctgcagggccgtt
gaccactgcagctttgggaaccacagctgccagcatgagtgtgttagcacgtttggtggg
ccacggtgccgctgcagagggggctacaacttgctgcccgacggcaggagctgtcaggcc
caggacctttgcaatggcgtagaccatgggtgcgagttccagtgcgtgagtgagggcttc
tcctaccgctgcctgtgccctgagcggtggcagctccaggcagatggcaagagctgcagc
cggtgccaggaaggccacgtggacctggttctgctcgtcgatggctccaagagcgtgcgt
ccgcagaacttcgagctggtgaagcgcttcgtgaaccagatcgtggacttcctggacgtg
tccccagaaggcacgcgcgtggggctggtgcagttctccagccgcgtgcgcaccgagttc
ccactgggccgctacggcacggcggccgaggtgaagcaggcggtcctggctgtggagtat
atggagcgcggcaccatgaccgggcttgcgctgcgccacatggtggagcacagcttttca
gaggcgcagggcgcgcggccccgggcgctcaacgtgccccgcgtgggcctggtcttcacc
gacggccgctcccaggatgacgtctcagtgtgggcggcgcgcgccaaggaggaaggcatc
gtcatgtacgccgtgggcgtaggcaaggcggtggaggacgagctgcgagagatcgcctcg
gagccagcggagctgcacgtgtcctactcccccgacttcagcaccatgacgcacctgctg
gagaacctcaaaggcagcatctgcccggaggagggcatcagcgcggggacagagcttcgg
agcccctgcgagtgcgaaagtcttgtggagttccagggccgcacgctgggggcgctcgag
agtctgtcgcagaaccatatcctttgggtccaggggcgcgggctggaggggagaagggac
ccccgcgagccccagcggcttccttaa
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