Phocoena sinus (vaquita): 116741222
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Entry
116741222 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04082
Neuroactive ligand signaling
psiu04723
Retrograde endocannabinoid signaling
psiu04727
GABAergic synapse
psiu04742
Taste transduction
psiu05032
Morphine addiction
psiu05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116741222
04082 Neuroactive ligand signaling
116741222
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116741222
04723 Retrograde endocannabinoid signaling
116741222
09157 Sensory system
04742 Taste transduction
116741222
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
116741222
05033 Nicotine addiction
116741222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116741222
Ion channels [BR:
psiu04040
]
Ligand-gated channels
GABA-A
116741222
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116741222
NCBI-ProteinID:
XP_032463279
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Position
16:complement(71791893..71794182)
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AA seq
460 aa
AA seq
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MDNGMFSSFIMIKNLLLFCISMNLASHFGLSQMPTSSVKDETNDNITVFTRILDGLLDGY
DSRLRPGLRERITQVRTDIYVTNFGPVSDTEMECTIDMFFXQSWKDEILQFKGPMQRLPL
NNLLASKIWTPDTFFHNGKKSIAHNVTTPNKLLRLDDGTLLYTVRLTISAECPMQLDFPM
VAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAEDGSRLNQYHLMRQTVGTENISTSTG
EYTIMTAHFHLKRKTGYFVFQTYLPCVMTVILSQLSFWLNRESVPAGTVFGLTMVLTMTT
LSISARNSLPKVAYAKAMDWFVAVCYTFVFSALIEFATVNYFTKTGWAWDSQKALEAAKI
KKKECELTLNKSTNAYTTGKMTHPPNIAKEQTPAGTSNVSSASVKPEDKTSENKKTYNSI
SKNDKMSXIIFPVLFGTFNLVYWATYLNRKPVIKGATSPK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggacaatggaatgttctctagctttatcatgatcaaaaacctccttctgttttgtatt
tccatgaacttagccagtcactttggcctttcacaaatgccaaccagttctgtaaaagat
gaaaccaatgacaacatcacagtattcaccaggatcttggatgggctcctggatggctat
gacagcagactgaggcctgggctcagagagcgtattactcaggtgagaacggacatctac
gtcaccaacttcggcccagtgtctgacacggaaatggaatgcaccatagacatgtttttc
tgacaaagctggaaagacgaaatccttcagtttaaaggtcccatgcagcgcctgcccctc
aacaacctccttgccagcaaaatctggactccagacaccttcttccacaatgggaagaag
tccatcgcccacaacgtgaccacgcccaacaagctgctgcggctggatgatggcactctg
ctgtacaccgtgcgcttgaccatctcggcagagtgcccaatgcaacttgacttcccgatg
gttgcccatgcctgccctctgaaatttggcagctatgcatatcctaattccgaagttgtc
tatgtctggaccaacggcacaaccaagtcggtggtggtggcagaagatggctccaggctg
aaccaataccacctgatgaggcagacagtgggcacagagaacatcagcaccagcacaggt
gaatacacaatcatgacggctcatttccatctgaagaggaagaccgggtactttgtcttc
cagacctatctcccctgcgtaatgactgtgatcttgtcgcaattgtccttttggctgaac
cgagagtcagtcccagccgggacagtgtttgggttgaccatggtgctgaccatgacaacc
ctcagcatcagtgcccggaactctctgcccaaagtggcttatgcgaaggccatggactgg
ttcgtagccgtgtgctacacttttgtgttctctgcgctgatcgagtttgccaccgtcaac
tatttcacaaagacaggctgggcctgggacagccaaaaagccttggaagcagccaagatc
aagaaaaaggagtgtgaacttacactaaataaatcaacaaatgcttatactactggaaag
atgactcaccccccaaacatcgcaaaggagcagacccctgcagggacctcaaatgtctct
tcagcctcagtaaaacctgaagacaagacttctgaaaacaaaaagacttacaacagcatc
agcaagaacgacaaaatgtcctgaattatattcccagtcctgtttggcactttcaaccta
gtttactgggcaacatatttgaataggaagccagtgattaaaggggctacctctccaaaa
tga
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