Phocoena sinus (vaquita): 116741317
Help
Entry
116741317 CDS
T07759
Symbol
SEC31B
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31B
KO
K14005
protein transport protein SEC31
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116741317 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116741317 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psiu02044
]
116741317 (SEC31B)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116741317 (SEC31B)
Secretion system [BR:
psiu02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
116741317 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
WDR54
VPS8_N
Motif
Other DBs
NCBI-GeneID:
116741317
NCBI-ProteinID:
XP_032463485
LinkDB
All DBs
Position
16:complement(57150525..57181446)
Genome browser
AA seq
1107 aa
AA seq
DB search
MTPVSSPKPSRKPLRGAGPCAWRRVWEVGPAGQDYFWPSAAAIHSAPLSSEALREDRLRL
RLRLLLRRARPLAWALCAGTSAQQLDASFSTDGILEIFEVDFRDPSLDLECKGVLSPSSR
FHKLIWGSFGNGLLEGSGVIAGGGDDGMLTLYSVTHILSSGKEPVITQIQKHTGAVRALD
FNPFQGNLLASGANDSEIFIWDLNNLSVPMTPGSKSQQPPEDIKALSWNRQVQHILSSAH
PSGKAVVWDLRKNEPIKVSDHSNRMHCSGLAWHPDMATQLVLCSEDDHLPVIHLXDLCFA
SSPLKVLESHSRGILSVSWSQAEXSAKDNQILCWNLESSEVVYKLPTLSSWCFDAQWCPW
DPPVFSAAFFDGXISLYSVMGRSWEVQQMRQADKVSFCPPISSSFSKVQHLPPLQVPEQV
AQASLISPLEKNPKWMRRPAGVSFAFGGKLVTFGLPSTRAHQVPQPCLRLVFISQVTTEP
EFLMRSAELQEGLGSGNLLNXSQNKIQQASLESEKMLWQFLKVTLEKDSRMKFLKLLGYN
KGELQKKVATXLKSDLGLGESPQPKGVDLNSNRQQAFCIQLMVPHLFSNRRKRSTGKLCH
LRSFCLSTDMLGTHMEQEGGRALTSEARLCYVCSGSVERLVECWAKCPRASSPMALQDLM
EKVVVPNRSLKLLRGADGVSPGPATTYRIAQYANLLAAQGSLVTAMSYLPSDSAQPPIQQ
LRDWLFHAQGSGVLGQQSPPFPFPRVIVGAAPHSQETSSPRLGFQSSHQVSSPSPRPRIF
TPPSSLVIPLTPSRPSPYQGSRMQNTSDYRPSGFQEAQSLPVVPGVRPALSQLRLSGGQR
VQAPNPVGFPGTWPLPGPPTAPPDIMQAGSASLPETPQRLPLLPVRAPGFNPMSSQPPAP
PVTFSAAHPPGGPGAPCADTFPTTGILTPQPGPQDSLENAPVPRGNLQRKELPETFMPPA
PITAPVMCLTPEPRGVLSSQPAVPSQLQLPPVKMDRKELPPEHQSLNISFEALLQRCSLS
ATDIKTKRKLDEAAQRLECLYEKLCEETLSPPVLAGLHEVAQCVDAGRFERGLAVHAQVV
SCSSFSEVSSFMPVLKSVLTIAYKLHI
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgtctcgtccccgaaaccttccaggaagcccctgcggggtgctgggccctgc
gcctggcggcgcgtgtgggaggtggggcctgcgggccaggactacttttggccctccgca
gccgccatccacagcgccccgctgagctccgaagccctgagagaagaccggctccggctc
cggctccggctcctgctacgccgcgccagacccctggcctgggctctctgcgcaggaaca
tctgcccagcagctagatgcctcctttagtacagatggcatattggaaatctttgaggtt
gatttcagggacccctctctggacttggaatgcaagggagtcctttctccctccagcagg
tttcacaagctgatctgggggagctttggcaacgggcttctggaaggctccggggttatt
gcaggcggcggggatgatggcatgcttactctatacagtgtgacccacatcctgtcttcg
ggaaaggagcctgtgattacccagatacagaagcacacgggggctgtcagagcccttgac
tttaatccgttccagggcaacctcctggcctcaggggccaatgattcagaaatcttcatt
tgggatttgaataacctgagtgtgccaatgaccccaggatccaagtcacagcagccccca
gaagacatcaaggcactctcttggaaccgtcaagttcaacacattctgtcttctgctcac
cccagtggcaaggcagtcgtgtgggatctcaggaagaatgaacctatcaaagtcagtgat
cacagcaacaggatgcactgctcaggcctggcctggcacccagacatggccacccagttg
gtgctatgttcagaagatgatcatcttccagtaattcatctgnntgacttgtgctttgcc
tcctcacccctgaaggtgctggagagtcacagcagggggatcctgtcagtgtcatggagt
caggctgagnntagtgccaaggacaaccagatcttgtgctggaacctggagagcagtgag
gtggtgtataagctacccacactgagcagctggtgctttgatgcgcagtggtgcccttgg
gaccctccagtgttctctgctgccttcttcgacggctgaatcagtttatactctgtgatg
ggtaggagctgggaagtccagcagatgagacaggctgacaaggtgtccttttgccctccg
atctcttcttcctttagcaaagtccagcatctcccaccattgcaggtgccagagcaagtg
gcccaagcatcactgatatctcccctggaaaaaaaccccaaatggatgagaaggccagca
ggtgtctcatttgcttttggggggaagctggttacctttggcctccccagcacccgtgcc
catcaggtgccacaaccttgcctccgcctagtcttcatcagtcaggtcaccacagaacct
gaattcctcatgcggtcagctgagctgcaggagggcctgggatcaggaaatctcctgaat
nntagtcagaacaagatccagcaagcatcactggaaagcgaaaagatgctctggcagttc
ctgaaagtgaccttagagaaggactccagaatgaaattcctaaaactattaggatacaat
aaaggtgaacttcagaagaaggtggccacatagttgaagagtgatttggggctgggtgag
agccctcagcccaagggagttgacctcaacagtaacagacaacaggccttttgcatccag
ctcatggtcccccacctgttttcaaacaggaggaagaggagcacagggaagctgtgccat
ttaagaagtttctgtctctctacagacatgctgggaactcacatggagcaggagggtggc
agggcactaacttctgaagccagactctgttacgtgtgctcaggaagtgtggagcggctg
gtggagtgctgggcaaaatgcccccgggcttcatcccccatggctctacaggacctgatg
gagaaggtggtggtccctaacaggagcttgaagctactgcggggtgctgatggggtgagc
ccaggccctgccacaacctacagaatcgctcagtatgccaacctcctggcagcccagggc
agcctggtcactgccatgagctacctacccagtgacagtgctcagccaccaattcagcag
ctgagagattggctttttcatgcccagggttctggtgtcttgggccagcagtctccccct
ttcccctttccccgggttattgtgggagctgctccccactctcaagagacatcatctccc
agactgggattccagtcttctcaccaggtttcatctccatctccaaggccaaggattttt
acacctccgtcatcacttgtgattcccttgacaccttcccgtcctagcccttatcagggc
tccagaatgcagaatacaagtgactacaggccatctgggttccaggaagcccagtctttg
cctgtggtccctggggtaaggcctgctttatctcagctgcggctgtcaggagggcaaagg
gtgcaagctcctaaccccgtaggattccctggaacatggcctcttcctggtccacccacg
gcacccccagacattatgcaggctggttctgcctccctgcctgagactcctcaaaggctc
cctctgcttcctgtgagagcaccaggcttcaaccctatgagctcccagccgccagcccct
cctgtcaccttctctgcagcacaccctccaggagggccaggtgctccatgcgccgatacc
ttcccaaccactggcatcttgactcctcagccaggacctcaagattccttggaaaatgct
ccagtgcccaggggaaacctccagaggaaagagttgccagagacattcatgcccccagca
ccaattactgctccagttatgtgcctcacccctgagccacgaggggtcctttcctcacag
cctgctgtccccagtcaacttcagctgccacctgtgaagatggacaggaaggagctgccc
cctgaacatcagtccttgaatatcagctttgaggcgcttctgcagcgctgctccctgtct
gccactgacataaagacaaaacggaagctggatgaagcagcccaacgtctagaatgtcta
tatgagaagctctgcgaagagacactctcgcctcctgtcctggctgggctccacgaggtt
gcccaatgtgtggacgcaggacgctttgagcggggcctcgctgtgcatgctcaggtggtg
agctgcagcagcttcagcgaggtctccagcttcatgcctgtcctgaagtccgtcctcacc
atcgcttataagctacacatctag
DBGET
integrated database retrieval system
