Phocoena sinus (vaquita): 116741468
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Entry
116741468 CDS
T07759
Symbol
TIAL1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116741468 (TIAL1)
03041 Spliceosome [BR:
psiu03041
]
116741468 (TIAL1)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116741468 (TIAL1)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116741468 (TIAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
116741468
NCBI-ProteinID:
XP_032463921
Ensembl:
ENSPSNG00000022095
UniProt:
A0A8C9EE16
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Position
16:complement(73646675..73671909)
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AA seq
392 aa
AA seq
DB search
MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQ
HTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGD
LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL
GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ
TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK
NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAWMG
GFGAQPPQGQAPPPVIPPPNQAGYGMASYQTQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacgacgggcagccccggactctatacgtaggtaacctctccagagatgtg
acagaagttcttattcttcagttattcagtcagattggaccctgtaaaagctgtaaaatg
ataacagagcaacccgatagcagaagggtcaactcttctgttggattttctgttttgcag
catacaagcaatgacccatattgctttgtggaattttatgaacacagagatgcagctgct
gcattagctgctatgaatgggagaaaaattttgggaaaggaggtcaaagtaaactgggca
acaacaccaagtagccagaaaaaagatacttccaatcatttccacgtgtttgttggggat
ttgagtccagaaattacaacagaagatatcaaatcagcatttgccccctttggtaaaata
tcggatgcccgagtagttaaagacatggcaactggaaaatccaaaggctatggctttgta
tctttttataataaactggatgcagaaaatgcaattgtgcatatgggaggtcagtggttg
ggtggtcgtcaaatcagaaccaattgggccacacgtaaaccacctgcacctaaaagtaca
caagaaaataacactaagcagttgagatttgaagatgtagtaaaccagtcaagcccaaaa
aattgtactgtgtactgcggaggaattgcttctgggttaacagatcagcttatgagacag
acattctcaccatttgggcaaattatggaaatcagagtttttccagagaagggctattca
tttgtcagattttctacccatgaaagtgcagcccatgccattgtttcggtgaatggtact
acaattgaaggacatgttgttaaatgctattggggtaaagaatctcctgatatgactaaa
aacttccaacaggtcgactatagtcagtggggccagtggagccaagtttatggaaaccca
caacagtatggacagtatatggcaaatgggtggcaagtaccaccttatggagtatatggg
caaccatggaatcaacaaggatttggagtagatcaatcaccttcagctgcttggatgggt
ggatttggtgctcagcctccccaaggacaagcccctccccctgtaatacctcctcccaac
caggctggatatggcatggccagttaccaaacacagtga
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