KEGG   Phocoena sinus (vaquita): 116741568
Entry
116741568         CDS       T07759                                 
Symbol
BICC1
Name
(RefSeq) protein bicaudal C homolog 1 isoform X1
  KO
K18756  protein bicaudal C
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psiu03019]
    116741568 (BICC1)
Messenger RNA biogenesis [BR:psiu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116741568 (BICC1)
SSDB
Motif
Pfam: KH_BICC1 KH_1 KH_BICC1_1st SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_N4BP1_1st KH_2 KH_PARP14_6 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 116741568
NCBI-ProteinID: XP_032464210
Ensembl: ENSPSNG00000010653
UniProt: A0A8C9BTA6
LinkDB
Position
16:11636549..11941595
AA seq 974 aa
MAAQGEPGYLAAQSDPGSNSERSTDSPMPGSEDDLVAGAPLHSPEWSEERFRVDRKKLEA
MLQAAAEGKGKSGEDFFQKIMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKKEDVKEAKE
MIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKS
NQVSIAGQPAGVESARVRIRELLPLVLMFELPIAGILQPVPDPNSPSIQHISQTYNISVS
FKQRSRMYGATVIVRGSQNNTSAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHHLFMM
GRNGSNIKHIMQRTGAQIHFPDPSNPQKKSTVYLQGTIESVCLARQYLMGCLPLVLMFDM
KEEIEVDPQFIAQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLGLESS
GVTIATSPSPASCPAGLACPSLDILASAGLGLTGLGLLGPTALSLNTSTTPNSLLNALNS
SVSPLQSPSSGTPSPTLWAPPLASTSSATGFSAIPHLMIPSTAQATLTNILLSGVPTYGH
TAPSPPPGLTPVDVHINSMQTESKKISASLNGHTQSPNIKYGAISTSSLGEKVLSANHGD
PSRQTTASEQASPKSNPAEGCNDAFVEVGMPRSPSHSGNAGDLKQMMGPSKVSCAKRQTV
ELLQGTKNSHLHSTDRLLSEPELSTAESPLADKKAPGSERAAERAAAAQQNNERARLAPR
PSYVNMQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANH
VSYKPTMTTTFEGSSMSLSRSNSREHLGSGSESDNWRDRNGIGPASHSEFAASIGSPKRK
QNKSTEHYLSSSNYMDCISSLTGSNGCNLNSSFKGSDLPELFSKLGLGKYTDVFQQQEID
LQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPPNTRTSFLEGGASGRLP
RQYHSDIASVSGRW
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggccgctcaaggcgagcccggctacctggcggcgcagtcggacccgggctccaacagc
gagcgcagtaccgactcgcccatgcccggctcggaggacgacctggtcgccggagcgccc
ctgcacagccccgagtggagcgaggagcgcttccgcgtggacaggaagaaacttgaggcc
atgttacaagctgctgctgaaggaaaaggcaaaagtggggaagacttttttcagaagatc
atggaggaaacaaatacgcagattgcttggccatcaaaactgaagattggcgccaaatcc
aagaaagatcctcatataaaggtttctggaaagaaagaagatgttaaggaagccaaggaa
atgatcatgtctgtcttagacacaaaaagcaatcgggtcaccttgaagatggatgtttca
catacagaacattctcatgtaatcggcaaaggtggcaacaatattaagaaggtgatggaa
gaaacaggatgccacatccactttccagattccaacaggaataatcaagcagaaaaaagc
aaccaggtatctatagcaggacaaccggcaggagtagaatcggcccgagttagaattcgg
gagctgcttcctttggtgctgatgtttgagctgccgattgctggaattcttcaaccagtg
cccgatcctaattccccctctattcagcacatatcacagacgtacaacatttcagtgtca
tttaaacagcggtcccgaatgtatggtgctactgtgatagtacgagggtctcagaataac
acaagtgctgtgaaggaaggaactgccatgctgttggaacatctcgccgggagcttggcg
tcagctatccccgtgagcacgcaactagatatcgcagctcagcatcatctctttatgatg
ggtcggaatggaagcaacatcaaacatatcatgcagagaacgggtgctcagatccacttt
cccgatcccagtaatccacaaaagaaatccaccgtctacctccagggcaccattgagtct
gtctgtcttgcaaggcaatatctcatgggttgtcttcctcttgtgctaatgtttgatatg
aaggaagaaatcgaagttgatccacagttcattgctcagttgatggaacagctcgacgtc
ttcatcagtattaaaccaaagccaaaacagccgagcaagtctgtgattgtgaaaagtgtt
gagcgaaatgcgttaaatatgtatgaagcaaggaaatgtctcctcggacttgaaagcagt
ggggttaccatagcaaccagtccatccccagcatcatgccctgccggcctggcatgtccc
agcctggatatcttagcttccgcaggcctcggactcactggactaggtcttttgggaccc
actgccttatctctcaatacttcgacaaccccgaactcacttttgaatgctcttaatagc
tcagtcagtcctttgcaaagtccgagttctggtacccctagccccacattgtgggcacct
ccacttgctagtacttcaagtgccacaggtttttctgctataccacaccttatgattcca
tctactgcccaagccacattaaccaatattttgttgtctggagtgcccacctacgggcac
acagctccatctccccctcctggcttgactcctgttgatgtccatatcaacagtatgcag
acagaaagcaaaaaaatctctgcttcgttaaacggacacacacagtctccgaatataaaa
tatggtgcaatatccacttcatcacttggagaaaaagtgctgagtgcgaatcatggtgat
ccatccagacaaacaactgcatctgagcaggcatctcccaaatcaaaccctgcagaaggt
tgtaatgatgcttttgttgaagtaggcatgccccgaagtccttcccattctggaaatgct
ggtgacttgaaacagatgatgggtccctccaaagtttcctgtgccaagaggcagacagta
gaactattgcagggcacaaaaaactcacacttacacagcactgacaggttgctctcagag
cctgagctgagtactgcagaaagccctttggctgacaagaaggctccagggagtgagcgt
gctgcagagagggctgccgctgcccagcagaacaatgaaagggcccgccttgccccacgg
ccatcatatgtcaacatgcaggcttttgactatgaacagaaaaagctattagcaaccaaa
gctatgttaaagaaaccggtggtgacggaggtcagaacacccacaaatacctggagtggc
ctcgggttttctaaatccatgcccgctgaaactatcaaggagctgagaagggccaaccat
gtgtcctataagcccacaatgacaaccacttttgagggttcatcaatgtccctctcgagg
tccaacagtcgtgaacacctgggaagtggaagcgaatccgataactggagagaccgaaat
ggaataggacccgcaagtcatagtgaatttgcagcttctattggcagccccaagcgtaaa
cagaacaaatcaacggagcactatctcagcagtagcaattacatggactgcatttcctcg
ctgacaggaagcaatggctgtaacctgaacagctctttcaaaggctctgacctccctgag
ctcttcagcaaactgggcctgggcaaatacacagacgtcttccagcaacaagagatcgat
cttcagacattcctcactctcacagatcaggatctgaaggagctgggaattacaactttc
ggtgccaggaggaaaatgctgcttgcaatctcagaactaaataaaaaccgaagaaagctc
tttgaaccgccaaatacacgcacctctttcctggaaggcggagcaagtgggaggctaccc
cgtcagtatcactcagacattgctagtgtcagtggccgctggtag

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