Phocoena sinus (vaquita): 116741582
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Entry
116741582 CDS
T07759
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiu03009
]
116741582 (DDX21)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116741582 (DDX21)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116741582 (DDX21)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
Pre-60S particles
Helicases
116741582 (DDX21)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116741582 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
116741582
NCBI-ProteinID:
XP_032464270
Ensembl:
ENSPSNG00000018882
UniProt:
A0A8C9CJ85
LinkDB
All DBs
Position
16:21440687..21464762
Genome browser
AA seq
785 aa
AA seq
DB search
MPGKLLSEADLESDTAMAKVEMPRKRNEKKGKKEKPKSNKTEEAAEEKDETISPKAKKVK
KKAGPFEADMSSPKSKKAKKKEEPSQDDIISPKTKSAKKSKEPREKTVVSPKTKKLIKNE
EPSENDLGAPKSKKMKKEKEVNGEIGEKSPNLKNGFPHSGPDSDSKEAASEESNSELEQE
ITVEQKEGAFSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTF
SFAIPLVEKLQGELQDRKRGRAPQVLVLTPTRELAGQVSRDFSDITKKLAVACFYGGTPY
GGQIERMRNGIDILVGTPGRIKDHLQNGKLELTKLKHVVLDEVDQMLDMGFADQVEEILC
VAYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKC
HWTQRAAVIGDVIRVYSGYQGRTIIFCETKKEAQELSQNVSIRQDAQSLHGDIPQKQREI
TLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICV
CFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIVHFKQSA
ERLIEEKGAVEALAAALAHISGATSVSQRSLINSDVGFVTMILQCSIEMPNISYAWKELK
EQLGEDIDSKVKGMVFLKGKQGVCFDIPTASVTEVQEKWHDSRRWQLSVATEQPELEGPR
EGYRSFRGQREGNRNYRGQREGNRGLRGQRERNRSFRGQRSGGGNKSNRFQNKGQKRNFS
KAFGQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaacttcttagtgaagcggatttggagtcggacacggccatggcgaaagtg
gagatgccgcgaaagcgaaatgagaagaaaggtaaaaaagagaagccaaaatctaataag
actgaagaggcagcagaagaaaaggacgaaacgatttctcccaaagctaaaaaggttaaa
aagaaagcagggccttttgaggctgacatgagttctcctaaatccaaaaaggcaaaaaag
aaagaggagccatctcaagatgacattatttctcctaagacgaaaagtgcgaaaaaatca
aaggagccccgtgaaaagacagttgtttctcctaaaaccaaaaagctaataaaaaatgag
gagccttctgagaatgacttgggtgcgcctaagtccaagaagatgaagaaagaaaaagaa
gtgaatggagaaattggagagaaaagccccaacctgaagaatggattccctcattctgga
cctgactccgactccaaggaagctgccagtgaagaaagtaacagtgagttagagcaggaa
ataactgtggagcaaaaagaaggcgctttctctaattttcccatatctgaagaaactatt
aaacttctcaaagcccgtggggtgaccttcctgtttcctatacaagcaaagacgtttcac
cacgtctatagtgggaaggacttgattgcacaggcacggacaggaactgggaagacattc
tcctttgctatacctttggttgagaaacttcagggagaactgcaagaccggaagagaggc
cgtgcccctcaggtactggttcttacacccacaagggagttggcaggtcaagtaagcaga
gatttcagtgacatcacaaaaaaactggcagtggcttgtttttatggtggaactccctac
ggaggacaaattgaacgcatgcggaatgggattgatatcctggttgggacaccaggtcgt
atcaaagaccacctgcagaatggcaagctagagctcaccaaacttaagcatgttgtcctg
gatgaagttgaccagatgttggacatgggctttgctgatcaagtggaagagattttatgt
gtggcatacaagaaagattcagaagacaatccccaaacattgcttttttctgcaacttgc
cctcattgggtttacaatgttgctaagaaatacatgaaatctacatatgaacaagtggac
ctgattggtaaaaagacccagaaaacggcaataactgtagagcatctggctatcaagtgc
cactggactcaaagggcagcagttattggggacgtgatccgagtgtacagtggttatcaa
gggcgcactatcatcttctgtgaaaccaagaaagaagcccaggagttgtcacagaatgtg
tccataaggcaggatgcccagtcattacacggagacattccacagaagcaaagggaaatc
accctgaagggttttagaaatggtgattttggagttttggttgcaaccaatgtcgctgca
cgtgggttagacatccccgaggttgatctggttgtacagagttctccaccaaaggatgtg
gagtcctacattcatcgttctggacgaacaggtagagctggaaggactgggatttgcgtc
tgcttttatcagcataaggaagaatatcagttagcccaagtggagcaaaaagcgggaatt
aaatttaagagaataggtgttccttctgcaacagagataataaaagcttctagcaaagat
gccatcaggcttttggattctgtgcctcccactgcgattgttcacttcaagcagtcagcc
gagaggctgatcgaggagaagggagctgtggaagccctggcagcagccctggcccatatt
tcaggtgccacgtcagtcagccagcgctccttgatcaactcagatgtgggttttgtgacc
atgatcttgcagtgctcaatagaaatgccaaatattagttatgcttggaaagaacttaaa
gagcaactgggtgaggatattgattccaaagtgaagggaatggtctttctcaaaggaaag
cagggtgtttgctttgatatccctactgcatcagtaacagaagtacaggaaaaatggcat
gattcacggcgctggcagctttctgtggccacagagcaaccagagctagaaggaccacgg
gaaggatatcgaagcttcaggggacagcgggaaggaaacagaaactacaggggacagcgg
gaaggcaatcgaggtctcaggggacagcgggaaagaaatagaagcttcagaggacagcga
tcaggaggtggcaacaaaagtaacagattccaaaacaaaggccagaagcggaattttagt
aaagcattcggacagtaa
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