Phocoena sinus (vaquita): 116741631
Help
Entry
116741631 CDS
T07759
Symbol
PPRC1
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116741631 (PPRC1)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
116741631 (PPRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
116741631
NCBI-ProteinID:
XP_032464373
Ensembl:
ENSPSNG00000016660
UniProt:
A0A8C9CBT3
LinkDB
All DBs
Position
16:58581898..58596321
Genome browser
AA seq
1667 aa
AA seq
DB search
MAARRGLRDGVAPLLSGGSGPDPGGGVRSSCWGSRSQAPYGTVGAVSGGEQVLLHEEGDD
SGFVNLSRLGPCLRDKDLEMEELILQDGTLLGTMHSYMDASLISLIEDFGGLGESRLSLE
DQNEVSLLTALTEILDNADSENLSPFDSIPDSELLVSPREGSSLHRLLSLSRTPPERDLI
TPTDPLGPSTGSSRVSGVEMSLTDPPWDFSPPSFLETSSPKLPSWRPPRSRPRWGQSPPP
QQRSDGEEEEEVAGFSSEMLAGELNNSVSSIADFPMHLACPEEEDKTAVAAEMAVQAAGD
ESISSLSELVRAMHPYCLPNLTHLTALEDELQEQPGDLTLPEDCVVLEIVGQAATAGNDL
EIPVVVRQIPTGPQPVLLDNSLEASAALQLLMPTLEAETEAAVPREALCPEKEGLSLDSK
EKLESACLLEPREVMEPMAPKGPQNPPANTMLSSQRARKGRKKKSKEQPAACAEGYARRL
RSASRGQSTAVTELTSQGGSLPQEDLQREVVPPRGRGKPRAWARAWAAALEKPGSGNLES
SAGQASPAKEGPLDLYPSLVDPIQANPVSTHLSLVDSAEADPMPLDSVEADPTAVDPDPT
VADPVPVDPELVDCALANSELVDPLPADPVLIDPVLADSAVDGAVVVPISDDLPSVDPIL
AKPVQVDSLPNDLAPVDPVLVKSRPTDPRRGAVSSAQGSTAPQLLLESESSDPPKAISPE
IKEVMGPLKGESGTSATAQEARPRPLSLSEYRRRRQQRQAEAEERNPHPPAGKWPSLPET
PTGLADIPCLVPPATAKKTTLQRSPEAPSEACFAPVGPSPASPSPEPPASKPVASTPIEQ
VPSQEMLLPARPPPAVQSMPPTMPTALPFPTGGLGMTPMLPLPTNGQSVPSLPPPPLQPP
SVPMSVGPVPPDPFTHYAPVPPWPCYPPLSPSGYPCLPPPPTVPLVSGTPGAYAVPSTCN
VPWVPPPAPVPPYSSSCTYGPLGWGPGLQHPPFWPAVPPPPLPLTSVGRAVPSPKVEPSG
IPPGPPDSVLTVPMAPPLSLGAAGQGAPQIEPTKVEVKPVPASPHLKHKVSSPVHSPRIK
APPCLPAERVAVEEPASERLKPEPQEARPREKAPSPVAKAVPTSAPRQSTTTKLPAVHPA
RLRTLSFLPTPRTQGPEDVVQAFISEIGIEASDLSSLLEQFEKSEAKKECPPLAPADSLA
VGNSGSVDTPQEKRPLDRLQAPELANVAGLTPPATPPHQLWKPLAAVSLLAKAKSPKSTA
QEGTLKPEGVTEAKHPAAACLQEGVHGPSPVHVGSGDHDYCVRSRTPPKKTPALVIPEVG
SRWNVKRHQDITIKPVLSLGPATPLPPCTAASQKPLDHRTSNDQADPPAPCLAPSTLLSP
EASPCRNDTNTRTLPDPSAKQQSIRCYRKACRSASPPSRGWQGRRGRSNRSVSSGSNRTS
EASSSSSSSSSSSSRSRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSS
SSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQRQRVLQKERAIEERRVVFIGKIPGRMTRS
ELKQRFSVFGEIEECTIHFRVQGDNYGFVTYRYAEEAFAAIESGHKLRQADEQPFDLCFG
GRRQFCKRSYSDLDSNREDFDPAPVKSKFDSLDFDTLLKQAQKNLRR
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgccggggactgagagacggagtcgcgccgcttctaagtgggggctccggc
cccgaccctggcggtggagtgcgcagcagctgttgggggagtcggagccaagcgccgtat
ggcactgtgggcgctgtgagtggtggggagcaggtgctgctgcatgaggagggggatgat
tctggctttgtcaatctatctcggctgggcccctgtttgagggacaaggacttagagatg
gaggagctgatactgcaggatgggacactgctggggaccatgcacagctatatggatgcc
tccctcatttccctcattgaagattttggtggccttggagagagcaggttatctctggag
gaccagaatgaagtgtcactgctcacagctctaacagagatcttggacaatgcagattcc
gagaacctgtctccatttgacagcattcctgactcagagctgcttgtgtcacctcgggag
ggctcctctctgcacaggctgctcagcctctctcggacacccccagaacgtgacctcatc
accccgactgacccattggggcccagcacaggcagtagtagagtgagtggggttgagatg
tctctcacagatcctccttgggacttctctccaccctctttcttggagacctcctccccc
aagcttcctagctggagacccccaaggtcaagaccccgctggggccagtccccacctccc
cagcagcgtagtgatggggaagaagaggaggaggtggccggcttcagcagcgagatgctt
gctggggagctcaacaactctgtgagcagcattgcagacttccccatgcacctggcctgt
cccgaggaggaagataaaacagcagtagcagcagagatggcagtgcaggcagctggcgat
gagagcatctcctccctgagtgagctggtgcgggccatgcacccgtactgcctgcctaac
ctcacccacctgacagcacttgaggatgagcttcaagagcagccaggtgatttgacactg
cctgaggattgtgtggtgctggaaattgtgggccaggcggccacagctggcaacgacctg
gagatcccagttgtggtgcgacagatccctactggaccccagcctgtcctcctggataac
tcgctagaggccagtgcggccttgcagctgctcatgcctacactagaggcagagacagag
gctgctgtgcccagggaagccctctgccctgagaaagaggggttgtcactggactcaaag
gaaaagctggagtcagcctgcttgttggagcccagggaggtcatggagccaatggcaccc
aaggggcctcagaacccaccagccaacacaatgctaagttcccagagagctcgaaagggc
aggaagaagaagagcaaggagcagccagctgcctgtgcagaaggctatgccaggaggctg
aggtcagcctctcgtgggcagtctacagcagttacagagctgacctctcagggaggcagc
ttgcctcaggaggaccttcaaagagaggttgtgcctccccgtggtagagggaagccccgg
gcttgggctcgggcctgggcagctgccttggagaagcctggctctgggaacttggagagt
agtgctggacaagctagtcctgctaaagaaggtcctctagacctctaccccagcctggtt
gaccccatccaagccaaccctgtttcaacccatctctcactggttgactctgctgaagct
gaccccatgccacttgactctgttgaagctgatcccactgcggttgaccctgatcccact
gtggctgaccctgtacctgttgaccctgaactggttgactgtgctttagcgaactcagag
ctggttgaccctctcccagctgacccagtgctgattgacccagttctggctgactcagca
gttgacggtgcagtggtggttcccatctcagatgacttgccttcagttgaccctatccta
gccaagccagtacaagttgactctcttcccaatgacctggctccagttgaccctgtacta
gttaagtctaggccaactgatcccagacgtggtgcagtgtcatcagcccaggggagtaca
gccccccagctcctcctggagtcagagtcctcagaccccccaaaggccatcagtcctgaa
attaaggaggtcatgggtcctctgaagggggaaagtggtactagtgcaacagcccaggaa
gccaggcctcggcctcttagcctatctgagtaccggcgacgaaggcagcagcgccaagca
gaggcagaagagaggaacccccatcccccagctgggaagtggcccagcctcccagaaact
cccacagggctggcagacatcccttgtcttgtcccaccagccacagccaagaagacaact
ctgcagagaagccctgaggctccttctgaggcttgctttgctcctgtgggtcccagccct
gcctctcctagtcctgagccacctgcaagcaaacctgtggcctcaactcccattgagcag
gtgccatcccaagagatgctactgccagcaagaccacctcctgctgtgcagtccatgccc
cccacaatgcccactgccctgccttttcccacgggtgggctgggcatgacccccatgctg
ccccttcccacaaatgggcaaagtgtccccagtctgcccccaccacccttgcagcctcct
agtgttccgatgtctgtggggccagtgccacctgatccctttactcactatgcccctgtg
ccaccctggccttgttatccccccttgtccccttctggctatccttgcttgccccctcca
ccgacggtgcccctagtgtctggtactccaggtgcctatgctgtgccctccacttgcaat
gtgccttgggtacctcctcctgccccagtcccaccttatagctccagctgtacctatggg
cccttgggatggggcccagggctgcaacaccctccattctggcctgctgttcccccacct
cctttgcctctaacctctgttggaagagctgttccctcacccaaggtggagcccagtggc
atcccacctggccctcctgatagtgttctgactgtgccgatggctcctcccctcagtctt
ggggcagctggtcagggagctccacagatagagcccaccaaggtggaggtcaagccagtg
cctgcatctccccatctgaaacacaaggtgtcctccccggtgcacagccctcggatcaag
gctccaccgtgtctgcctgctgagagagtggctgttgaggagcctgcatcagagaggcta
aagcctgagccccaggaagctaggcccagggagaaggcaccctctcctgttgccaaggct
gttcccacatctgcaccaaggcagagcactaccaccaagctgcctgctgtccacccagcc
cgtctaagaacactgtcctttctgcctaccccacgtacccagggtcctgaggatgtggta
caggctttcatcagtgagattggaattgaggcatcggacctgtccagtctgctggagcaa
tttgagaaatcagaagccaaaaaggagtgccctcccctggctcctgctgacagcctggct
gtaggaaactcaggcagcgttgacactccccaggagaagaggcccctagaccggttacaa
gccccagaactggccaacgtggcagggctcacccctccagctacccctccccatcagtta
tggaagcccctggctgctgtgtcactgctggccaaagccaaatctcctaagtccaccgcc
caggagggaaccctgaagcctgaaggagttacagaggccaaacatccagctgcagcctgc
ctccaagaaggggtccatggccctagtccagtccatgtgggctctggggaccatgactat
tgtgtccggagcaggacccccccaaaaaagacgcctgccctagtcattccagaggtgggc
tcccgatggaatgtcaaacgccatcaggatatcaccatcaaacctgtcttgtctctgggc
ccagccaccccgctgcccccatgcacagctgcctcccagaagccacttgatcacaggact
agcaatgatcaggcagatcccccagccccttgccttgccccatccaccttgctgtcccct
gaggcctcaccctgccggaatgacacgaacactaggactctccctgatccctcagccaag
cagcagtcaatacgctgttatcgaaaagcctgcaggtcagccagccccccaagccggggc
tggcaaggccgccgtggccgcagcaaccgttctgtcagctctgggtccaaccggaccagc
gaagcatcttcctcctcatcctcatcgtcgtcttcctcatcccggtcccggtcccggtcc
ctctccccgccacacaagaggtggcgaaggtccagttgcagttcctctggacgttcccga
agatgctcttcctcttcctcctcctcatcttcctcctcgtcttcctcatcctcatcatct
agttcccgaagtcggtcccgctctccatctcctcgccggagaagtgacaggaggcggcgg
tacagttcttatcgttcacacgaccattaccaaaggcagagagttctgcagaaggagcgt
gcaatagaagagagaagagtggtcttcattgggaagatacctggtcgcatgactaggtca
gagctgaaacagaggttctctgttttcggagagattgaggagtgcaccatccacttccgt
gtccaaggtgacaactatggcttcgtcacttatcgctatgccgaggaggcatttgcagcc
attgagagtggccacaagctgaggcaagcagatgaacagccctttgatctctgctttggg
ggccgcaggcagttctgcaagagaagctattctgatcttgactccaaccgggaagacttt
gaccctgctcctgtaaagagcaaatttgattctcttgactttgacacattgttgaaacag
gcccagaagaacctcaggaggtaa
DBGET
integrated database retrieval system
