Phocoena sinus (vaquita): 116741681
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Entry
116741681 CDS
T07759
Symbol
TDRD1
Name
(RefSeq) tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116741681 (TDRD1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116741681 (TDRD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
116741681
NCBI-ProteinID:
XP_032464495
Ensembl:
ENSPSNG00000018700
LinkDB
All DBs
Position
16:69095617..69130178
Genome browser
AA seq
1046 aa
AA seq
DB search
MTEPFNFEKNESKLPPHESLRSTGGHPNHPNFRLKSPENGNKKKNFLLCEQTKQYLASQE
DNSVSSNSSGISGEVAGSEGDRMMLPTGNSVSPLNVGNNSPPKEVNSKTSNNVSPAKSKK
VHQLVESSLSINDPALFSSLGPPLQSTTCHCCGLFGPLRCSQCKQTYYCSVTCQRRDWAA
HSIVCKPVQQNFHKLEDNKSPFETKNMEVKKESDCPLGVTKERAICADKIMFSDLRSLQL
RKSMEIKGIVTEFKHPGDFYVQLRSSEVLEYMNQLSASLKETYANKAHEEDYIPVKGEVC
VAKYTVDQTWNRVIIQDVDVLQKKAQVLYIDYGNEEIIPVNRIHQLNRKIDLFPPCAVKC
FVANVIPAEGNWSNDCIKTIKSLLMQQYCSLKVVDILKEVISFAVDVMLTSSGKFLDHVL
IEMGYGLKPKGQNSKKQSADSSDLEDVRKITAENKTIIDRSGLIPKVLTLNVGDEFCGVV
AHIQTPEDFFCQRLQSGHKLAELQASLTAYCSQVSPRSDFYPTIGDICCAQFSGVKPSLG
IWTPEAIYLMRKIVQNKMITVKVVDQLENSSLVELMDRSVMPHISVTRVLIDAGFAVGDK
GVVTVKPSDMKEASVPSGVEAEISLLEWTWVELAVDQTVDVVVCVVYSPGEFYCHVLKED
ALKKLSDLNKLVAEYCQQKLPNNFKAEVGQPCCAFFVDIQPRNKHWTREAIARFQTCVTG
IKLQARVAEITENGVGVELTDLSTSYPRIITDVLIEEHLVLKASSPCKDLVKNSPVNKHG
LQIDAPWLQATSSAEQWRTIELPVNKTVQASVLEIVNPNLFYALPNEMPEDQEKLCVLTA
ELLEYCSAQKSRSAYRPKIGDACCARYTGDDFWYRAVVLGMSAADVKVLYADYGNIETLP
LCRVQPISASYLELPFQIIKCSLEGPMELNGSCSQLIIELLKNLMLNQNVMLSVKGFIKN
VHAVSVEKCSENGTINIADKLVMYGLAKNVTSEKQSALNKEKGNRMNCCCTELQKQVEKH
EQILLFLLNNPTNQNKFTEMKKLLKS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccatttaattttgagaaaaatgaaagcaagcttccaccgcatgagtcttta
agaagtaccggaggacatcctaaccatcctaatttcaggttgaaaagcccagagaatgga
aataaaaagaaaaattttttgctttgtgagcaaaccaaacagtatctggctagtcaggag
gacaattcagtatcttcaaactctagtggcatcagtggagaagtggctggatccgaagga
gacaggatgatgctgccaacaggtaactctgtgtcaccattaaatgttggaaataattca
ccacccaaagaagtaaatagtaagactagcaataatgtgtctcctgcaaaatcaaaaaaa
gtacaccagttggttgagagttccttgtccataaatgatccagcactcttcagctcatta
ggacctcctcttcagtcgacaacttgccattgctgtggtctgtttgggccgctgaggtgc
tcacagtgcaagcagacgtactactgctctgtcacatgccagagaagggactgggcagcc
cacagcatcgtgtgcaaacctgttcagcagaatttccacaaacttgaagataataaatca
ccttttgaaacaaagaacatggaagtgaaaaaagagagtgactgtcctcttggagttact
aaagaaagagccatttgtgctgataaaataatgttttctgatttgagaagcctacaactc
aggaaaagcatggaaataaagggtatagttactgaattcaaacacccaggtgacttttat
gtgcagttacgttcttcagaagttttagaatacatgaaccaactgtctgcgagcttaaag
gaaacatatgcaaataaggcacatgaagaagattatattcctgtaaagggggaagtttgt
gttgccaagtacactgttgatcagacctggaacagagtaataatacaagatgttgatgtg
ctgcagaagaaggcacaagtcttatatattgattatggaaatgaagaaataattccagta
aacagaattcaccaactaaacagaaaaattgacttgtttcctccttgtgccgtaaaatgc
tttgtagccaatgttatcccagcagaggggaattggagcaatgattgtatcaaaactatt
aaatcactgttaatgcagcagtactgctctctgaaggttgtggacatcttaaaagaagtg
atttcctttgctgtggatgttatgctgacaagttcaggaaaattcttagaccatgtgctc
atagaaatgggatatggcttgaaacccaagggacaaaattctaagaagcaaagtgcagat
tcaagtgatcttgaagatgtcaggaaaatcacagctgaaaacaaaactattatagacaga
agtggcctaatccccaaagtgttgactttgaatgtaggtgatgagttttgcggtgtggtc
gcccacattcagactccagaagacttcttttgtcaacgactacaaagtgggcataagctc
gctgaacttcaggcgtcacttactgcgtactgcagtcaagtgtctccacgctctgatttt
tatccaaccattggtgatatctgctgtgctcagttctctggagtaaagccatcattagga
atttggactccagaagctatttatctgatgagaaaaattgtacagaacaaaatgatcaca
gtgaaagtggtggaccagttggaaaacagttccctggtggaacttatggataggtctgtg
atgccccacatcagtgtcaccagagtgctcatcgatgcaggctttgccgtgggggacaag
ggggtagtgacagttaagcccagtgacatgaaagaagccagtgttccctcgggtgtagaa
gcagaaatcagtctgttggagtggacgtgggttgaacttgctgttgatcagacagtagat
gttgtggtctgtgtggtgtatagtcctggagaattttactgccatgtgcttaaagaggat
gctctaaagaaactcagtgacttgaacaaattggtagcagaatattgccagcagaagttg
cctaataattttaaggcagaagtagggcaaccttgttgtgctttttttgtagatatacag
cctagaaacaaacactggaccagagaagccatagcaagatttcagacgtgtgtcacaggg
ataaaactccaagcccgagtggctgaaatcactgaaaatggagtgggagttgaactcacc
gatctttccacttcttatcccaggataattactgatgttctgattgaagaacatctggtt
ttaaaagctagttcaccatgtaaagacttagtgaaaaacagtcctgttaataaacatggt
cttcaaattgatgccccatggcttcaagccacctcttcagctgagcagtggaggacaata
gaattgccagttaataaaactgtacaggcaagcgtattagaaattgtaaacccaaacttg
ttttatgctctaccaaatgaaatgccagaagatcaggaaaaactgtgtgtattgacagcc
gaattgttagaatattgcagtgctcagaaaagtcgatcggcctatagaccaaaaattgga
gatgcgtgctgtgccagatacacaggtgatgatttctggtaccgtgccgttgttctgggg
atgtcagctgctgatgtgaaagtgctctatgcagactatggaaacattgaaactctgcct
ctttgcagagtgcagccaatctctgccagctacctggagcttcctttccaaattattaaa
tgttcccttgaaggaccaatggaattgaatggaagctgttctcaattaataatagagcta
ctgaaaaatttaatgttgaatcagaatgtaatgctttctgtaaaaggatttatcaagaat
gtccacgcagtgtcagttgagaagtgttctgagaacggtactatcaatatagctgataag
ctggtgatgtatggtctggcgaaaaacgtcacatctgaaaagcaaagtgctttaaataaa
gaaaaggggaacaggatgaattgctgctgcacagagctacagaaacaagttgaaaaacat
gaacagattcttctcttcctcttaaacaatccaaccaatcaaaacaaatttactgaaatg
aaaaaattgttaaaaagttaa
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