Phocoena sinus (vaquita): 116741754
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Entry
116741754 CDS
T07759
Symbol
LINGO4
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116741754 (LINGO4)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116741754 (LINGO4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
ig
LRR_14
LRR_Zer-1
V-set
LRRNT
Ig_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
116741754
NCBI-ProteinID:
XP_032464649
Ensembl:
ENSPSNG00000000787
UniProt:
A0A8C9AX97
LinkDB
All DBs
Position
1:complement(111091309..111095565)
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AA seq
590 aa
AA seq
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MAAATTPKQAWPAVFFLLLLSGGSSGGCPAVCDCTSQPRAVLCAHRRLEAVPGGLPLDTA
LLDLSGNRLWGLQRGMLSRLGLLRELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIV
GPRVFSGLSSLTLLDIRLNQIVLFLDGAFGELGSLQQLEVGDNHLVFVAPGAFAGLAKLS
TLTLERCNLSTVPGLALARLPALGVLRLRELDIGRLPGGALQGLGQLKELEIHHWPPLEA
LEPGSLTGLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQ
ELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFSSPDKLVTLRLSGNPLTCD
CRLVWLLRLRRRLDFGTSPPACAGPQNVQGKSLREFSDILPPGHFTCQPALIRKSGPRWV
IAEEGGHAVFSCSGDGDPAPIVSWMRPQGAWLGRAGRVRVLEDGTLEIRSVQLRDRGAYV
CVVSNVAGNDSLRTWLEVIQVEPPNSTLSDPNITMPGIPGPFFLDSRGIAMVLAVGFLPF
LTSVTLCFGLIALWSKGKGRVKHHMTFDFVAPRASGDKNSGGNRVTAKLF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggccactactccaaagcaagcctggcccgccgtatttttcctgctcctcctg
tctggggggagtagcggcggctgccctgctgtgtgtgactgtacctcccaaccccgggca
gtgctctgtgcccaccggcgactggaggctgtaccagggggactcccactggacaccgcg
ctcctggacctgagtgggaaccgcctatgggggcttcagcggggaatgctctcccgcctg
ggcctgctccgggaactggacctcagctacaaccagctgtccaccctcgagccaggggcc
ttccatggtctgcagagcctgctcaccctgaggctgcagggcaatcgtctgcgaatcgtg
ggccccagggtcttctcaggcctgtcttccctcacgctgctggacattcgcctcaaccag
attgtactcttcctcgatggagctttcggggagctaggcagcctccagcagctggaggtt
ggggacaaccacctggtgtttgtggctccgggagcctttgctggactggccaagctgagc
accctcaccctggagcgctgcaacctcagcaccgtgcctggcctggccctggcccgcctt
ccagcgctaggggtcctaaggctccgagaattagatattgggaggctgccgggaggggcg
ctgcaagggctggggcagttaaaggagctggagatccatcattggccacctctggaggct
ctggagcctgggagcctgactgggctcaatctcagcagcttggccatcacccgctgcaat
ctgagctcggtgcccttccaagcgctgtaccacctgagcttcctcagggtcctggatctg
tctcagaaccccatctctgccatcccggcccggaggctcagccccctggtgcggctccag
gagctccgactgtcaggggcatgcctcacctccatcgctgcccacgccttccatggtttg
actgccttccacctcctagacgtggcggataacgcccttcagacactggaggaaacagcc
ttctcttctccagacaaactggtcaccctgaggctgtctggtaaccccctgacctgtgac
tgccgcctcgtctggctgctccggctccgccgccgcctggactttggcacatccccccct
gcctgtgccggcccccagaacgtccaggggaagagcctgagggagttttcagacatccta
cctccagggcacttcacttgccaaccagccctgatccgaaagtccgggccacgatgggtc
attgcagaggagggggggcatgccgttttctcctgctctggagatggagacccagccccc
atcgtctcctggatgaggcctcagggggcttggctgggaagggccgggagagtaagggtc
ctggaggatgggacgctggagatccgctctgtgcagctacgggatagaggggcctatgtc
tgtgtggtcagcaatgtagctgggaatgactccctgaggacgtggctggaagtaatccaa
gttgaaccaccaaatagcactctctctgaccccaacattaccatgccagggatcccaggg
cctttcttcctggatagcagaggcatagctatggtgctggcagtcggcttcctccccttc
ctcacctcggtaaccctgtgctttggcctcattgccctctggagcaaaggcaaaggccgg
gtcaaacatcacatgacctttgactttgtggcaccccgagcctctggggataagaactct
gggggtaaccgggtcactgccaagctcttctga
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