Phocoena sinus (vaquita): 116741760
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Entry
116741760 CDS
T07759
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04659
Th17 cell differentiation
psiu04710
Circadian rhythm
psiu05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
116741760 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
116741760 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
116741760 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116741760 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
psiu03310
]
116741760 (RORC)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116741760 (RORC)
Nuclear receptors [BR:
psiu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116741760 (RORC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116741760
NCBI-ProteinID:
XP_032464661
Ensembl:
ENSPSNG00000000836
LinkDB
All DBs
Position
1:complement(111097452..111120176)
Genome browser
AA seq
531 aa
AA seq
DB search
MDRAPQRHHRASQATEEAVLPSGMTKELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVIT
CEGCKGFFRRSQQCNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMS
KKQRDSLHAEVQKQLQQRQQQQREQAAKTPPAGAQGADPLACTLGLPDGQLPLGSSPDLP
EASACPPSLLRAPGCGPSYSNSLAKAGLNGASYHLEYSPERGKTEGRENCYGTGSQPTPD
RRGLHFEDPRHPGLGEPGRGPDSYFSPSFRSTPEAPYASLTEIEHLVQNVCKSYRETCQL
RLEDLLGQRSTVFSREEVAGYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQN
DQIVLLKAGAMEVVLVRMCRAYNADNHTVFFEGKYGGMELFRALGCSELISSIFDFSHSL
SALHFSEDEIALYTALVLINANRPGLQEKRKVEQLQYSLELAFHHHLCKTHRHGILAKLP
PKGKLRSLCSQHVEKLQTFQHLHPIVVQAAFPPLYKELFSTEIESPEGLSK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccgagcctcgcaggcaacggaggaagccgtcctg
ccttcagggatgacaaaggagctgctggctgcaaagaagacccacacctcacaaattgaa
gtgatcccttgcaaaatctgtggggacaaatcatctgggatccattacggggttatcacc
tgtgaggggtgcaagggtttcttccgccggagccagcagtgtaacgtggcctactcctgc
acccgtcagcagaactgccccattgaccgcactagccgaaaccgatgccagcactgccgc
ctgcagaaatgcctggccctgggcatgtcccgagacgctgtcaagtttggccgcatgtcc
aagaagcaaagggacagcctacatgctgaggtgcagaaacaactgcaacagcggcaacag
cagcaaagggaacaagcggccaagacccctcctgcaggagcccaaggagcagaccccctc
gcctgcaccttggggctcccagatgggcagctgcccctgggctcctcgcctgacctgccg
gaggcctcagcctgtccccccagtctcctgagagccccaggctgcgggccctcctactcc
aacagcttggccaaggccgggctcaacggggcctcgtaccacctggaatacagccctgag
cggggcaagaccgagggcagagagaactgctatggcacaggcagccagccgacccctgac
aggcgtggactccacttcgaggaccccaggcaccctgggcttggggaaccaggacggggc
ccggacagctacttcagccccagtttccgcagcaccccagaggcgccttatgcctccctg
acggagattgagcatctggtgcagaacgtttgtaagtcctaccgagagacgtgtcagctg
cggctggaggacctgctcggacagcgctccaccgtcttctcccgagaggaggtggccggc
taccagaggaagtcaatgtgggagatgtgggaacgctgtgcccaccgcctcaccgaggcc
attcagtacgtggtggagttcgctaagaggctctcgggctttatggagctctgccagaat
gaccagatcgtgctactcaaagcaggagccatggaagtagtgctggtcaggatgtgccgg
gcctacaatgctgacaaccatacagtcttttttgaaggcaaatacggtggcatggagctc
ttccgagccttgggctgcagcgagctcatcagctccatctttgacttctcccactccctg
agtgccttgcatttttccgaggacgagattgccctctacacggccctcgtcctcatcaac
gccaaccggccagggctccaagagaaaaggaaagtagaacagctgcagtacagtctggag
ctggcctttcatcatcatctctgcaagactcatcgccacggcatcctggcaaagctgcca
cccaaggggaagcttcggagcctgtgtagccagcatgtggaaaagctgcaaaccttccag
catctccaccccatcgtggtccaagctgctttccctccactctacaaggaactcttcagc
actgaaatcgagtcacctgaggggctgtccaagtga
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