Phocoena sinus (vaquita): 116741788
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Entry
116741788 CDS
T07759
Symbol
PSD
Name
(RefSeq) PH and SEC7 domain-containing protein 1 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116741788 (PSD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116741788 (PSD)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
116741788 (PSD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
116741788
NCBI-ProteinID:
XP_032464743
Ensembl:
ENSPSNG00000017329
LinkDB
All DBs
Position
16:complement(58804168..58818036)
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AA seq
1058 aa
AA seq
DB search
MAQGAMRFCSEGDCAISPPRCPRRWLPEGPVPQSPPASMYGSTGSLLRRVAGPSPQGREL
GRVTAPCTPLRGPPSPRVAPSPWAPSSPTGKPPPGARSSVVIFRFVEKASVRPLNGLPAP
GGLSRSWDLGGVSPPSPTPALGPGSNRKLRLEASTSDPLPAGGGSALPGSQGLLHGPPAQ
PQVGADGLYSSLPNGLGGPSEHLATLFRGPADTGLLNQGDTWSSPREVSSHAQRIARAKW
EFFYGSLDSPSSGAKPPEQAPPSPPGVGSGQGSGVAVGRAAKYSETDLDTVPLRCYRETD
IDEVLAEREEADSAIESQPSSEGPPGTARPPAPRPGPCLGPRSSLGSGNEDEDEAGGEED
VDDEVFEASEGARPGTRMPHSGPLKSPLPFLPGTSPLADGPDSFSCVFEAILESHRAKGT
SYTSLASLEALASPGPTQSPFFTFELPPQPPAPRPDPPASAPLAPLEPDSGTSSAADGPW
TQRGEEEEAEAKQAPRREPPSPCHSEDSYGLGAAPLGSEPPLSQLVSDSDSELDSTERLA
LGSTDTLSNGQKADLEAAQRLAKRLYRLDGFRKADVARHLGKNNDFSKLVAGEYLKFFVF
TGMTLDQALRVFLKELALMGETQERERVLAHFSQRYFQCNPGALSSEDGAHTLTCALMLL
NTDLHGHNIGKRMTCGDFIGNLEGLNEGGDFPRELLKATPKKRGPLCHYWNPSSPPTTPR
PLQVPQANCTEALYSSIKNEKLQWAIDEEELRRSLSELADPNPKVIKRVSGGSGSGSSPF
LDLTPEPGATVYKHGALVRKVHADPDCRKTPRGKRGWKNFHGILKGMILYLQKEEYQPGE
APSEAELKNAISIHHALATRASDYSKRPHVFYLRTADWRVFLFQAPSLEQMQSWITRINV
VAAMFSAPPFPAAVSSQKKFSRPLLPSAATRLPQEEQMRTHEAKLKAMASELRQHRAAHL
GKKARGKEAEEQRQKEAYLEFEKSRYGTYAALLRVKLKAGSEELDAVEAALAQAGSTEDG
LPPPHSSPSSQPNTSSQPRAQCPGPESRAGAGSGRWKP
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcccagggtgccatgcgcttctgctcggaaggcgactgtgccatctccccgccacga
tgcccacgccgctggctccccgaaggcccagtgccccagagcccccccgccagcatgtat
ggtagcacaggctccctactacggcgggtggcaggtccaagtccccaaggccgggaactt
ggacgtgtgacagcaccctgtacacccctgcgtggccccccttcaccccgtgttgctccc
tcaccctgggcaccctcttcacccactgggaagcccccaccaggggcccggagctctgtg
gtcatattccgctttgtggagaaggccagcgtgaggccactgaatggtctacctgctcct
ggaggcttgagtcggagctgggacctgggtggggtctctcctcccagtcccaccccagcc
cttggtcctggctccaaccgaaagttgcggctagaagcatccacatcagacccactccca
gctggaggaggctcagctctgcctggcagccagggccttttacacgggccaccagctcaa
cctcaggttggagcagacggcctttactcctctctccccaatgggctggggggaccctct
gagcacctggccacattattccgaggacctgctgacactggactccttaaccagggggac
acctggtcctcacccagagaagtctcctctcatgcccagagaatcgctcgagccaaatgg
gaattcttctatggctctttggactcccccagctcaggtgctaagcccccagagcaggcc
cccccatctccacctggggtgggctcagggcagggctctggggtggctgtggggcgagca
gccaagtactccgagacggacctggacacagtgcccctgaggtgctaccgcgagaccgac
atcgatgaggtgctggctgagcgggaggaggctgactcggccatcgagagtcagcccagc
tctgagggcccgcctggcactgcccgcccacctgccccacgtcccggcccatgccttggc
cctcgttccagcctgggcagtggcaatgaggatgaggatgaggcaggtggggaagaggat
gtggacgacgaggtgtttgaggcctcagaaggggcccggccaggcacccgaatgcctcac
tccgggcctctcaagtcgcctctgccctttctacctgggaccagccccttggctgatggg
cccgactctttcagttgtgtgtttgaagccatcttggagtcacaccgggccaagggcacc
tcctacaccagcctcgcctcgctggaggccctggcctcacctggcccaacccagagcccc
ttcttcacctttgagctgcctccccagccccctgcccccaggcctgacccacctgcttct
gccccacttgcccctctcgaaccggattctggtaccagctctgctgctgatgggccttgg
acacagagaggggaggaagaggaggcagaggccaagcaggccccaaggagggagccccct
agtccctgccactcagaagacagctacgggctgggggcagctcccctgggcagtgaacca
cccctgagccagctcgtgtctgattcggactcagagctggacagcacagagcggctggcc
ctgggaagcacagacaccttgtctaatgggcagaaagcagacctggaggctgcgcagcgc
ctagctaagaggctgtaccgactagacggcttcaggaaggcggatgtggcccggcacctg
ggcaagaacaacgacttcagcaaacttgtggctggagagtacctgaagttctttgtcttc
acgggcatgactctggaccaagctctcagggtgtttctgaaggagctggccttaatgggt
gagacccaggaacgggagcgcgtgctggcccacttctcccagagatacttccagtgcaat
cctggagccctgtcctcagaggacggtgcgcacacgctgacctgcgccctcatgctactc
aatacggatctccacggccacaacatcgggaagcgcatgacctgcggagacttcattggt
aacctggagggcctcaacgaaggcggcgacttccccagagagctgctcaaggctactccc
aagaagaggggtcccctatgccactactggaacccatcctctcctccgactaccccaagg
cccctgcaggtcccccaggccaactgtacagaggccttgtacagctccattaagaatgaa
aagttgcagtgggccatagacgaggaggagctgaggcgctctctgtctgagttggccgac
cccaaccccaaggtcatcaagagagtcagcgggggcagtggcagcggctccagccctttc
ctggacctgactcccgagcccggggccacagtctacaagcacggggccttggtgcgaaag
gtgcacgcagaccctgactgcaggaagacacctcggggcaagcggggctggaagaacttc
cacgggatcctcaagggcatgatcctctacctgcagaaggaggagtaccagcctggggag
gccccgtcggaggctgagctgaagaacgccatcagcatccaccacgcactggccacgcgt
gccagtgactacagcaagaggccccacgtcttctacttgcgcaccgctgactggcgggtc
ttcctcttccaggctccgagcctggagcagatgcagtcctggatcactcgcatcaatgtg
gtggctgctatgttctccgcaccccccttcccagctgctgtcagttctcagaagaagttc
agccgccctctgctgcccagtgctgccacccgcctcccccaggaggagcagatgcggacc
cacgaggccaagctgaaggccatggcaagtgagttgcggcagcaccgggctgcccatctg
ggcaagaaggcccggggcaaggaggctgaggaacagcggcagaaggaggcctatctggag
tttgagaaatctcgctatggcacatatgcagcgctgcttcgggtcaagctgaaggcgggc
agtgaagagctggatgcggtagaggcagcactggcccaagccgggagcacggaagacgga
ctcccccctcctcactccagtccctcctcgcagcccaacacctccagccagccccgggct
cagtgtcctggcccagagtctcgcgcaggggcaggcagtgggcggtggaagccctga
DBGET
integrated database retrieval system
