Phocoena sinus (vaquita): 116741795
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Entry
116741795 CDS
T07759
Symbol
SLAMF1
Name
(RefSeq) LOW QUALITY PROTEIN: signaling lymphocytic activation molecule
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
psiu04517
IgSF CAM signaling
psiu05162
Measles
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116741795 (SLAMF1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116741795 (SLAMF1)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
116741795 (SLAMF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116741795 (SLAMF1)
04090 CD molecules [BR:
psiu04090
]
116741795 (SLAMF1)
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
SLAM/CD2 family
116741795 (SLAMF1)
CD molecules [BR:
psiu04090
]
Proteins
116741795 (SLAMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
V-set
Syndecan
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
116741795
NCBI-ProteinID:
XP_032464762
LinkDB
All DBs
Position
1:complement(117898557..117930893)
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AA seq
343 aa
AA seq
DB search
MDPKGLLSLNVLLFFLSSIAFALSCRTGEGSTNCPSDILGRLGSSVRLPLTSDGISKSMN
KSIHILVTMAESPXRHTKKNIVSLDLRKGDSPTTIWRMAMSFIQKNLSLRILKSRKEDEG
WYFMSLEENISVQQFCLQLKLYEQVSTPEIKVLNSQQGKNGNCSLIWPAMVEKGDHVAYN
WGEEAGAPLLSPTKNSHLLYLTLGPQDANNIYVCTVSNPISNGSQTFIPWSRCRPRSSKS
RQWALYAGLFLGVIVGVIMILQVVILLLRRRGKTDNYQPTMEAKSLTIYAQVQKSGSVQK
KPDSLPAQDPCTTIYVAATEPVPEPVQESSSITVYASVTLPES
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaaggggctcctctccttgaacgtcctgctgttttttctttcctccatagct
tttgcgctgagctgcagaacaggtgagggctcaacgaattgccccagtgatatccttggg
cggctgggaagcagtgtgcggctgcccctgacatctgacgggataagtaagagcatgaat
aagagtattcacatccttgtcacaatggcagaatcacccnggagacacaccaagaagaac
atagtgtctctggatctgcggaaaggtgactctccaacgaccatctggagaatggctatg
agtttcatccagaaaaacctgagcctgaggatcctgaaaagcaggaaggaggacgagggc
tggtactttatgagcctggaggaaaacatttcagtccagcaattttgcctgcagctgaag
ctctatgagcaggtctccactccggaaattaaggttttgaattcacagcaagggaagaac
gggaactgtagcctgatctggcctgcaatggtggagaagggggaccatgtagcttacaac
tggggtgaggaggcgggcgcccccctgctgagccccaccaagaactcccacctcctgtat
ctcacccttggccctcaggatgccaacaacatctacgtttgcaccgtgagcaaccccatc
agcaatggctctcagaccttcatcccgtggtccagatgcaggcctcggtcctcaaaatca
agacaatgggcactgtatgctgggctcttcttaggggtcatcgttggtgtcatcatgatt
ctgcaagtagtgatactactgttgagaagaagaggtaaaacagacaattaccagccaaca
atggaagcaaaaagccttactatctatgcccaagtccagaaatcaggttctgttcagaag
aaacctgactctctgccagctcaggacccctgcaccaccatttacgttgctgccacagag
cctgtgccagagcctgtccaggaatcaagctccatcacagtatatgccagcgtgacactt
ccagagagctga
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