Phocoena sinus (vaquita): 116741899
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Entry
116741899 CDS
T07759
Symbol
PCGF6
Name
(RefSeq) polycomb group RING finger protein 6 isoform X1
KO
K11470
polycomb group RING finger protein 6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03083
Polycomb repressive complex
psiu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116741899 (PCGF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116741899 (PCGF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116741899 (PCGF6)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
116741899 (PCGF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
RAWUL
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-RING_6
zf-RING_10
TRAF3_RING
BUD22
zf-C3HC4_4
RING_XB3-XBAT31
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
116741899
NCBI-ProteinID:
XP_032464957
Ensembl:
ENSPSNG00000018827
UniProt:
A0A8C9CTB9
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Position
16:complement(59554579..59582029)
Genome browser
AA seq
351 aa
AA seq
DB search
MEGVPVITAGTAGSAKAEGAAAMPPPPPVSPPALTPAPAAGEEGQPPLSEAGAPGCSGSR
PPELEPERSLGRLRGRFEDEDEELEEDEDLEEEEEEEEEEEMSHFSLRLEGGRPDSEDEE
ERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQT
QPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKPAVPQPVPSSKGRSKK
VLESVFRIPPELDMSLLLEFIGANEGTGHFKPLEKKFVRVSGEATIGHVEKFLRRKMGLD
PACQVDIICGDHLLERYQTLREIRRAIGDAAMQDGLLVLHYGLVVSPLKIT
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggagggggtccctgtgataacggcaggcaccgcgggctctgccaaggctgagggagcc
gcagccatgccgcccccgcctcccgtctcccctcctgcccttaccccggcgcccgcagcg
ggtgaggagggccagccgccactgtccgaggcgggggctcccggctgctcgggctcccgg
ccccctgagctggagccggagcgcagcctgggccgcttgaggggccgcttcgaggacgag
gacgaggagttggaagaggatgaggacctggaggaggaagaagaggaggaagaggaagaa
gagatgagccacttctcgctgaggctggaggggggccggcccgactccgaggacgaggag
gagcgcctgataaatctctctgagctgaccccatacatcttgtgttccatttgcaaaggt
tacttaatagatgcaactaccattacagaatgtcttcatacattttgtaaaagctgcatt
gtaagacacttttactatagcaacaggtgtccaaaatgcaacatagtagtacatcagaca
caacctctttacaacataaggttggaccgacagttacaagacatagtgtacaaattagtg
atcaatctagaggaaagagaaaaaaagcaaatgcatgatttctataaagaaagaggtcta
gaagtacctaaacctgctgttccacagccagtcccttcgagcaaaggaagatctaagaaa
gtcttagaatcagtgtttcgtattccacctgaacttgacatgtctttattactagagttt
attggtgctaatgaaggcacgggacattttaagccattggaaaagaagtttgtccgagtt
tcaggagaagcaactattggacatgtagaaaaattcctcagaagaaaaatgggtcttgat
ccagcttgtcaggtagatatcatctgtggtgatcacttgttagagcgctatcagactcta
agggaaattcgacgtgcaataggtgatgcagcaatgcaggatggtctgctggtccttcat
tatggacttgtggtttctcctttgaaaattacttga
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