Phocoena sinus (vaquita): 116741918
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Entry
116741918 CDS
T07759
Symbol
ATRNL1
Name
(RefSeq) attractin-like protein 1
KO
K24332
attractin
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
psiu04091
]
116741918 (ATRNL1)
Lectins [BR:
psiu04091
]
C-Type lectins
Others
116741918 (ATRNL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_5
Kelch_1
Kelch_3
EGF_LMN_ATRN
Kelch_4
Kelch_6
Kelch_2
CUB
EGF_TEN
PSI
NANM
EGF_Teneurin
EGF_laminin
EGF_2
PSI_integrin
TMEM100
Motif
Other DBs
NCBI-GeneID:
116741918
NCBI-ProteinID:
XP_032464985
Ensembl:
ENSPSNG00000020672
UniProt:
A0A8C9CY72
LinkDB
All DBs
Position
16:69926738..70629609
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AA seq
1380 aa
AA seq
DB search
MEPGGRARTGSPQPAAPGPWRARPAGGGGGGASFWLLDGNSWLLCYGFLYLALYAQVSQS
KLCERTGSCFSGRCVNSTCLCDPGWVGDQCQHCQGRFKLTEPSGYLTDGPINYKYKTKCT
WLIEGYPNAVLRLRFNHFATECSWDHMYVYDGDSIYAPLIAVLSGLIVPEIRGNETVPEV
VTTSGYALLHFFSDAAYNLTGFNIFYSINSCPNNCSGHGKCTTSVSVPSRVYCECDKYWK
GEACDIPYCKANCGSPDHGYCDLTGEKLCVCNDSWQGPDCSLNVPSTESYWILPNVKPFS
PSVGRASHKAVLHGKFMWVIGGYTFNYSSFQMVLNYNLESSIWNVGTVSRGPLQRYGHSL
ALYQENIFMYGGRIETSDGNVTDELWVFNIHSQSWSTKTPTVLGHGQQYAVEGHSAHIME
LDSRDVVMIIIFGYSAIYGYTSSIQEYHISSNTWLVPETKGAIVQGGYGHTSVYDEITKS
IYVHGGYKALPGNKYGLVDDLYKYEVNTKTWTILKESGFARYLHSAVLINGAMLIFGGNT
HNDTSLSNGAKCFSADFLAYDIACDEWKILPKPNLHRDVNRFGHSAVVINGSMYIFGGFS
SVLLNDILVYKPPNCKAFRDEELCKNAGPGIKCIWNKNHCESWESGNTNNILRAKCPLKT
AASDDRCYRYADCASCTANTNGCQWCDDKKCISSNSNCSMSVKNYTKCHVRNEQICNKLT
SCKSCSLNLNCQWDQRQQECQALPAHLCGEGWNHIGDACLRINSSRENYDNAKLYCYNLS
GNLASLTTSKEVEFVLDEIQKYTQQKVSPWVGLRKINISYWGWEDMSPFTNTTLQWLPGE
PNDSGFCAYLERAAVAGLKANPCTSMADGLVCEKPVVSPNQNARPCKKPCSLRMSCSNCT
SNGMECMWCSSTKRCVDSNAYIISFPYGQCLEWQTATCSPQNCSGLRTCGQCLEQPGCGW
CNDPSNTGRGHCIEGSSRGPMKLVGMQNNEMVLDTSVCPKEKNYEWSFIQCPACQCNGHS
TCINNNVCEQCKNLTTGKQCQDCMPGYYGDPTNGGQCTACTCSGHANICHMHTGKCFCTT
KGIKGDQCQLCDSENRYVGNPLRGTCYYSLLIDYQFTFSLLQEDDRHHTAINFIANPEQS
NKNLDISINASNNFNLNITWSVGSTAGTISGEETPIVSKTNIKEYRDSFSYEKFNFRSNP
NITFYVYVSNFSWPIKIQIAFSQHNTIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWA
SRRREQLLRERQQMASRPFASVDVALEVGAEQTDFLRGSLEGAPKPIAIEPCAGNRAAVL
TVFLCLPRGSSGAPPPGQSGLAIASALIDISQQKPSDSKDKTSGVRNRKHHLSTRQGTCV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggggggccgggcccgcactggttccccgcagccggcggccccggggccgtgg
agagctcggccggcgggcggcggtggcggcggcgcctccttctggctgctggacgggaac
agctggctgctgtgctatggcttcctctacctggcgctctacgcgcaggtatcccagtcc
aagctctgcgagaggaccggctcctgcttctcgggccgctgtgtcaactccacctgcctc
tgcgacccgggctgggtgggggaccagtgccagcactgccagggcaggttcaagttaaca
gaaccttctggatatttaacagatggtccaattaactataagtataaaactaaatgtaca
tggctaattgaaggctatccaaatgcagtgttaagattaagattcaatcattttgctaca
gaatgtagctgggatcatatgtatgtttatgatggagattcaatatatgcacctttaata
gctgtacttagtggtttgatagtccctgaaataaggggaaatgaaactgtgcctgaagtt
gttacaacgtctggctatgcactgttacatttttttagtgatgctgcatataatctaact
ggcttcaacattttttactcaatcaattcttgtcctaacaattgctctggtcatgggaag
tgtacaactagtgtctctgttccaagtagagtatattgtgagtgtgataaatactggaag
ggtgaagcttgtgacattccttactgtaaagccaattgcggcagtccagatcatggttac
tgtgacctaacaggtgaaaagctgtgcgtctgcaatgatagttggcaaggtcctgattgt
tctttgaatgttccttccactgagtcttactggattctgccaaatgttaaacccttcagt
ccttctgtaggtcgggcttcccataaagctgttttacatgggaaatttatgtgggtgatt
ggtggatatacttttaactacagttcttttcaaatggtcctgaattacaatttagaaagc
agtatatggaatgtaggaactgtatcaaggggacctctccagagatatgggcattctctt
gctttatatcaggaaaacatctttatgtatggaggcagaattgaaacaagtgatggcaat
gtcacagatgaattatgggtttttaacatacatagtcagtcatggagtacaaaaactcct
actgtgcttggacatggtcagcagtacgctgtggagggacattcagcacatattatggag
ttggatagtagagatgttgtcatgatcataatatttggatattctgcaatatatggttat
acaagcagcatacaggaataccatatctcatcaaacacttggcttgttccggaaactaaa
ggagctattgttcaaggtggatatggccataccagtgtgtatgatgaaataacaaagtcc
atttatgttcatggaggctataaagcattaccaggcaacaaatatggattggtagatgac
ctttataagtatgaagttaacactaagacttggactattttgaaagaaagtgggtttgcc
agataccttcattcagctgttcttatcaatggagctatgcttatttttggaggaaatacc
cataatgacacttccttgagtaacggtgcaaaatgtttttctgccgatttcctggcatat
gacatagcttgtgatgaatggaaaatattaccgaaaccaaaccttcatagagatgtcaac
agatttggacactctgcagttgtcattaatgggtccatgtatatatttggaggattttct
agtgtactccttaatgatatacttgtatacaagcctccaaattgcaaggctttcagagat
gaagaactttgtaaaaatgctggtccagggataaaatgtatttggaataaaaatcactgt
gaatcttgggagtctgggaatactaataatattcttagagctaagtgccctctgaaaaca
gctgcttctgatgacagatgttacagatacgcagattgtgccagctgtactgccaataca
aatgggtgccagtggtgcgatgacaagaaatgcatttcatcaaacagtaactgcagtatg
tctgtgaaaaactataccaaatgtcatgtgagaaatgagcagatttgtaacaaacttacc
agttgtaaaagctgttcactaaacttgaattgtcagtgggatcagagacaacaagagtgc
caggctttaccagctcatctttgtggagaaggatggaatcatattggggatgcttgtctt
agaattaattccagtagagaaaactatgacaatgcaaaactttattgctataatcttagt
ggaaatcttgcttcattaacaacctcgaaagaagtagaatttgtactggatgaaatacag
aagtatacgcaacagaaagtatcaccttgggtaggcttacgcaagatcaatatatcctac
tggggatgggaagacatgtcaccatttacaaacacaacactacagtggcttcctggtgaa
cccaatgattctgggttctgtgcgtatctagaaagggcagcagtggcaggcttaaaagct
aatccttgtacctctatggcagatggtcttgtctgtgaaaaacctgttgtcagtccaaat
caaaatgcaaggccttgcaaaaagccatgctctttaaggatgtcatgttccaactgtacc
agcaacggaatggagtgtatgtggtgcagcagcacgaaacgatgcgttgactcgaatgcc
tacataatctcttttccatatggacagtgtctggagtggcagactgccacctgctctcct
caaaattgttctggattgagaacctgtggacaatgtttggagcagcctggttgtggctgg
tgcaacgatcctagtaatacaggaagaggacactgcattgaagggtcttcccggggacca
atgaagcttgttggaatgcaaaataatgagatggttcttgacaccagtgtttgtcctaaa
gagaagaactatgagtggtcctttatccagtgtccagcttgccagtgtaatggacatagc
acttgcatcaataataacgtgtgcgaacagtgtaaaaatcttaccacaggaaagcagtgt
caagactgcatgccaggttattatggagatccaaccaacggaggacagtgtacagcttgt
acatgcagtggacatgcaaatatttgtcatatgcacacaggaaaatgtttctgcacaact
aaaggaataaaaggtgatcaatgccaattatgtgactctgaaaatcgctatgttggtaat
ccacttagaggaacatgttattacagccttttgattgattatcagtttacattcagctta
ttacaggaagatgatcgccatcatactgccataaacttcatagcaaacccagaacagtca
aacaaaaatttggatatttcaattaatgcatcaaacaactttaatctcaacattacatgg
tcagttggttcaacagctggaacaatatctggggaggagactcctatagtttccaagact
aatataaaagaatacagagatagtttttcctatgaaaaatttaactttagaagcaatcca
aacattacgttctatgtgtacgtcagcaacttttcatggcccattaaaatacagattgca
ttctcacaacacaatacaatcatggatcttgtgcagttttttgtcaccttcttcagttgt
tttttatccttattactggtggccgctgtggtgtggaagatcaaacaaacatgttgggct
tctcgacggagagagcaactgcttcgagaacgacagcagatggccagccgtccctttgct
tctgttgatgtagccctggaagtgggagctgaacaaacagactttctgcgagggtcatta
gagggagcacccaaaccaatagccattgaaccatgtgctgggaacagagcggcagttctg
actgtgtttctctgtctaccacgaggatcatcaggtgcccctcccccagggcagtcaggc
cttgcaattgccagtgccctaatagatatttcacaacagaagccttcagatagtaaagac
aagacttcaggagtccgaaatcgaaaacaccacctctcaacacgtcaaggaacgtgtgtc
tga
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