Phocoena sinus (vaquita): 116741932
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Entry
116741932 CDS
T07759
Symbol
LRIT1
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116741932 (LRIT1)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116741932 (LRIT1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
ig
Ig_3
LRR_4
Ig_2
fn3
Motif
Other DBs
NCBI-GeneID:
116741932
NCBI-ProteinID:
XP_032464995
Ensembl:
ENSPSNG00000022632
LinkDB
All DBs
Position
16:complement(34229992..34239735)
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AA seq
653 aa
AA seq
DB search
MSRWAAAGFAGPAGQSSKGQAPARPTEEPGAMRVAVGILCLLALGGPLQARGACPSQCSC
SLHVLGDGSKARTVVCNDPDMTLPPASVPLDTSSLRLERTAIRRVPGEAFKALGRLEQLW
LPYNALYELNALMLRGLRRLRELRMPGNHLATFPWAALRDAPKLRLLDLQANRLSTVPPE
AARFLGNLTFLDLSSNQLLRLPEELLTTWTHLQKGPFLPGHHVKLVLGLQDNPWVCDCRL
YDLVRLLEGWAPNLAFIEARLRCASPRSLAGLTFSQLELRKCRSPELHPGAASIRSPLGS
AVLLRCGASGVPGPEMSWSRANGHPLNGTVHQEVSSDGTIWTLLGLPAVSHLDSGDYICQ
AKNFLGASETLISLVVSEPQTSTEHSGGAAALWARTGEGAEAAAYNKMVARHVPHIPEPA
APATRPPVPNTKEQLILQPFQMGAPGEHLDVQAGPQEAQRVSSLKVVGDTYQSVTLVWKA
PQAGNTTSFSVLYAVFGQRDMRRVVVQPGKTRVTIRGLVPKIKYVACVCVQGLVPRKEQC
VIFSTDEVVDAEATQWLINVVVISVAAIIALPLTLLVCCGALQSRWRKCHTRGSAEATGA
YVNLERLGHSEDGSEELSQHSLSEADRLLSAHSSLDSQASGVRVGRRINEYFC
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtgggcagctgctgggtttgctgggccagcaggacagagcagtaagggacag
gcccctgcccggcctacagaggagccaggagccatgagggtggcggtgggcattctgtgc
ctcctggccctcggaggacccctgcaggcccggggcgcctgcccttctcagtgcagctgc
agcctccatgtcctgggcgatggcagcaaagccaggacagtggtgtgcaacgaccctgac
atgaccctgcccccagcatctgtccctctggacacctccagcctgcgcctggagcggacg
gccattcgcagggttcccggggaggccttcaaggcgctgggccgcctggagcagctgtgg
ctgccctacaacgcactctatgagctcaatgctctgatgctgaggggcctgcgccgcctg
cgcgagctgcgcatgcctgggaaccacctggccaccttcccctgggcggcgctcagggac
gcccccaagctgcggctgctggacctgcaggccaaccgcctctcgactgtgcccccggag
gccgcgcgcttcttggggaacctcaccttccttgacctctccagcaaccagctgctgagg
ctccccgaggagttgctcaccacctggactcacctgcagaagggacccttccttcccggc
caccacgtcaagctggtcctagggctgcaggacaacccctgggtgtgtgactgccgactc
tatgacctggtccgtctcctggaaggctgggccccaaacctggccttcatagaggccagg
ctgaggtgtgccagcccgcgcagcctggccggactgaccttcagccagctggaactgagg
aagtgccggagtccggagctccatccgggggcagccagcatcaggtcccccttgggcagt
gcagtattgctacgctgtggggcctcaggggtccctgggccggaaatgagctggagtagg
gccaacgggcacccactcaacgggacagtgcaccaggaagtctccagtgacggcacgatc
tggactctgctgggcctgcctgctgtgtcccaccttgactctggagactacatctgccag
gccaagaacttcctgggagcctctgagactcttatctccctggtcgtctctgagccccag
acatccacggaacacagtgggggcgcagcggcactgtgggcaaggacaggtgagggggca
gaagcagctgcatacaacaagatggtggccaggcatgtcccccacatccccgagcctgct
gccccagccactcggccccctgtgcccaacacgaaggagcaactaatcctccagcccttc
cagatgggggccccaggagagcacttggatgtgcaggcaggaccccaggaggcccaaagg
gtgagctctctcaaggtggtgggggacacttaccagagcgtgaccttggtgtggaaggcc
ccccaggctgggaacacaacttccttcagcgtcctctacgcagtcttcggacagcgcgac
atgcggcgggtggttgtgcagcctgggaagacccgtgtcaccatccgtgggctggtgccc
aagatcaagtacgtggcgtgtgtctgcgtgcagggcctggtgccccggaaggagcagtgt
gtcatcttctccactgacgaagtggtggatgctgaagccactcagtggctcatcaacgtg
gtggtgatcagtgtggctgccatcatcgccctgcccctcacgctgctcgtctgctgcggt
gctctccagagccgctggcgcaagtgccacaccaggggctccgctgaggccacaggtgcc
tacgtcaacctggagagactgggccacagtgaggatggctcagaggagctgtcccagcac
agcctcagtgaggccgacaggctcctctctgcccactccagcctggactctcaggcctcg
ggcgtcagggtgggcagacggatcaacgagtacttctgctga
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