Phocoena sinus (vaquita): 116741944
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Entry
116741944 CDS
T07759
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116741944 (CDHR1)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Cadherin related
116741944 (CDHR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
116741944
NCBI-ProteinID:
XP_032465015
Ensembl:
ENSPSNG00000022630
LinkDB
All DBs
Position
16:34191700..34213191
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AA seq
971 aa
AA seq
DB search
MVRVPDKPSPAGAHGRRWPWAPVGALGSGTGALACPRVGQTRDHAGAELSLRVFGCPLFC
VLFLAQANFAPYFFDNGVGSTNGNMALFSLPEDTPVGSHVYTLNGTDPEGDPVSYHISFD
PSARSVFSVDPNFGNITLIEELDREGSLEMPGPPLMHPASRGPYGASDSWTLRPCASQRE
DEIEAIVSISDGLNLVAEKVTILVTDANDEAPRFIQEPYIVQVPEDTPAGSSIAKVRAVD
RDTGSGGSVTYFLKNPHSTKFSVDRHSGVLRLQAGATLDYEKASAHFIAVVAKDGGGRLR
GASVVLSATTTVTVNVEDVQDMAPVFVGTPYYGYVYQDTLPMLAAEWCRRAQNEGERKAG
LLTWGLQGSEVLTVVAMDGDRGKPNRVLYSLVNGSDGAFEINETSGAISITQSPAQLRRA
VYELHVQVAEVSSAGTPAAQAMAPVTIRIVDLNNHPPTFYGESGPQNRFELSMYEHPPQG
EILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEAQVTIVVENSATIDFEKF
KVLTFKLLAIEVNTPEKFSSTADIVIQLLDTNDNVPKFTSHYYIARIPENAPGGSNVLAV
TAVDPDTGPWGEVKYSIYGSGADLFLIHPSSGIIYTQPWASLDAEDTARYNFYVKAEDME
GRYSLAEVFVTLLDVNDHYPQFGKRVQEKTMVLGTPVKIEATDQDAEEPNNLVDYSITHA
EPANVFDIDTHTGEIRLKNSIRSLDALHNITPSGDHTWSLEVQAKDRGSPSFSTTALLKI
DIIDTEMLSRNPMAAFLMQTKDNPMKAVGVLAGIMAIIVAITVLISTATFWRNKKSNKVL
PVRRVLRKRPSPAPRTSGIKWLKFRRTKAADKFVLREDPPNENCNNNSLGSAPPPKVPAP
PPPPSVAPSMGPAHWMVPTVSGSLAPQQPHPSPKPKALAKHKAAGRPVQSALVSELRQKF
EKKNVHSEAYF
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgtccctgacaagccgagcccagccggagcccacgggaggaggtggccgtgg
gccccggtgggcgcgctgggctctgggacgggagccctcgcctgcccgcgcgtgggccag
acgcgcgaccacgccggtgccgagctgtccctgcgcgtgttcgggtgtcctctgttctgt
gttctcttcctagcccaggccaacttcgccccctactttttcgacaacggggtgggcagc
accaacggaaacatggccctcttcagcctcccggaggacactcctgtgggctctcatgtg
tacaccctgaatggaacagaccccgagggagaccccgtctcctaccacatcagctttgac
cccagcgctagaagtgtcttttcggttgaccccaattttggaaacataaccctgattgaa
gagctggacagagagggctcccttgaaatgcccgggcctcctctgatgcacccagcctcc
aggggtccctatggtgcctcagactcctggacacttcgtccttgtgcttcacagagggag
gacgagattgaagctattgtcagcatttctgacggcctgaatctggtggcggaaaaagtc
actatcctggtgactgatgccaatgacgaggcacccaggttcatccaggagccctacatt
gtccaggttcccgaggacacacctgccgggagcagtatcgccaaggtccgtgcagtggac
agggacacaggttctggaggaagtgtcacctacttcctgaagaatccacactccaccaag
ttttctgtggaccgccacagtggtgtactgcgcctccaggctggggccaccctggactac
gagaaggcctcggcccacttcattgctgtggttgccaaggatggcggagggaggctgcga
ggggccagcgtggtgctctcggccaccaccacggtcacagtcaatgtggaggacgtgcag
gacatggcccctgtcttcgtgggcacgccctactacggctatgtgtaccaggacaccctt
ccgatgctggcagctgagtggtgcagaagggcacagaatgagggagagagaaaggccggg
ctgctcacatgggggctgcagggctcagaggtcctgaccgtcgtcgccatggatggagat
cgcggcaaacccaaccgtgttctctacagcctcgtgaacggcagtgatggagcctttgaa
attaatgagacgtctggagcaatctccatcacccagagccctgcccagctccggagagcg
gtgtatgagctgcatgtacaggtggctgaggtcagctctgcagggaccccagctgcccag
gccatggcccctgtcaccatccggatcgtggacctcaacaaccatccaccgacattctat
ggagagagtggaccccagaacagatttgagctgtccatgtatgagcacccgccccagggg
gagatcctgcggggcctcaagatcactgtcaatgactcagaccagggagccaatgccaaa
ttcaacctgcggctggtgggacccgggggcatcttccgagtggtcccccagacggtcctg
aatgaagcccaagtgacgatcgttgtagagaactcagccaccattgactttgaaaagttc
aaagtgttaaccttcaagctcctggccatcgaagtgaacaccccagagaagttcagctcc
acagcggacatcgtgatccagctcctggacaccaatgacaatgtccccaagttcacctcc
cactactacattgccaggatccccgagaatgccccagggggctccaacgtgttggctgtc
acagccgtcgatccagacacaggtccctggggtgaagtcaaatactccatctatggatcc
ggggcagacctcttcctgatccacccatcctctgggatcatctacacccagccctgggcc
agcctggacgccgaggacactgccaggtacaacttctacgtgaaggcagaggacatggag
ggcaggtacagcctagccgaggtgttcgtcacgctgctggatgtcaatgaccactacccc
cagtttggaaagcgcgtccaggagaagacaatggtgctggggaccccagtcaaaattgag
gccacagaccaggacgcagaggagcccaacaacctggtggactattccatcacccacgca
gagccagccaacgtgttcgacatcgatacacacacgggggagatccggctcaagaactcc
atccgctccctggatgccctgcacaacatcacacccagcggggaccacacgtggtcacta
gaggtgcaggccaaggaccgcggctccccatccttcagcaccacggccttgctcaagatt
gacatcatagacactgagatgctgtcccgaaaccccatggctgccttcctgatgcagacc
aaagacaaccccatgaaggccgtgggtgtgctggccggcatcatggccattattgtggcc
ataaccgtcctcatctccaccgccaccttctggcgcaacaagaagtccaacaaggtcctg
ccggtgcggcgtgtgctccgcaagcggcccagccctgcaccccgcacctccggcatcaag
tggctcaagttcagaaggaccaaggccgctgacaagtttgtgctcagagaggatcctccc
aatgagaactgcaacaacaacagcctgggaagtgcaccgccccccaaagtccccgctccc
cctccaccacccagcgtggcacccagcatgggaccagcccattggatggtgcctacagtc
tctggctcactcgcccctcagcaaccccatccatcaccaaaacccaaggccttggcaaaa
cacaaggctgcgggaagacccgtccagtcagctctggtctctgagctcaggcaaaagttt
gagaagaagaatgtgcatagcgaggcttacttctag
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