Phocoena sinus (vaquita): 116742013
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Entry
116742013 CDS
T07759
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116742013 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116742013 (SEC24C)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116742013 (SEC24C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
116742013
NCBI-ProteinID:
XP_032465150
Ensembl:
ENSPSNG00000017183
UniProt:
A0A8C9CE22
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Position
16:25663544..25691248
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AA seq
1120 aa
AA seq
DB search
MNVNQSAPPVPPFGQPQPVYLGHHQSSYGGQPGSTTAPTSYGAYNGPVPGYQQTPPPGVS
RAPPSSGAPPASTAQGPCGQTAYGQFGQGDVQNGPSSTVQMQRLPGYQPFGSAILAPVVS
QPAVLQPYGPPPTSAQVTAQLAGMQISGTVAPASPPSGLGYGPPTSLASASGSFPNSGLY
GSYPQGQAPPLGQAQGHPGTQPPQRSVPLQASSFTPPASGGPRMPSMTGPLLPGQSFGGP
PVSQPNHVSSPAPQALPPGTQMTGPPGPPLPPMHSSQQPGYQLQQNGSFGPTRGPQSNYG
SPYPGAAAFGSQPGPPQPLPAKRLDPDAIPSPQLNELPPQQKTRHRIDPDAIPSPIQVIE
DDRNNRGSEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVP
LAAVIKPLARLPPEEASPYVVDHGESGPLRCNRCKAYMCPFMQFVEGGRRFQCCFCSCIN
DVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNA
IRSGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVS
DVGDMFVPLLDGFLVNVNESQAVITSLLDQIPEMFADTRETETVFAPVIQAGMEALKAAE
CAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCV
DLFLFPNQYVDVATLSVVPQLTGGSVYKYACFQVENDQERFLSDLRRDVQKVVGFDAVMR
VRTSTGIRAVDFFGAFYMNNTTDVELAGLDGDKTVTVEFKHDDRLNEENGALLQCALLYT
SCAGQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLSSPVKTVRDTLITQ
CAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQL
VTSMDVAETNVFFYPRLLPLTKSPIENTTEPPAVRASEERLSNGDIYLLENGLNLFLWVG
ASVQQGVVQSLFGVSSFSQITSGLSVLPVLDNLLSKKVQGLIDSLRAQRSRYMKLIVVKQ
EDKLETLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQLLS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttaaccagtcagctccacctgtgccgccgtttgggcagccccagcctgtctac
ctagggcatcatcaatccagctatggtgggcaaccagggtccacaactgcccccacttcc
tatggagcctacaatggcccagtaccaggctatcagcaaacccctcccccaggtgtttca
agagccccaccttcttcaggggcacctccagcctcgacagcacagggcccttgtggccag
actgcatatggccagtttggacaaggagatgtacagaatgggccaagctccactgttcag
atgcagaggctccctgggtatcagccatttgggtcagccatattggcccctgtggtcagc
cagccagctgtgcttcagccctatggccctcccccaacaagtgcacaggtgacggctcag
ctggccggaatgcagatcagtggtactgtggccccagcctctccaccttcagggctaggc
tatggcccaccaacatcgctggcctcagcctcaggaagtttccctaactctggtctgtat
ggctcctatcctcagggccaagctcctccccttggccaggcccagggtcatcctgggacc
cagcctccccagcgatctgtcccactacaggcctccagcttcacacccccagcttcaggg
ggtcctcggatgccttcgatgactggtcctctcttgcctggacagagttttggggggccc
ccagtgagccagcccaaccacgtgtcctcacctgctcctcaagctctgccccctggcacc
caaatgactgggcccccaggaccaccactaccacctatgcactcctcccagcagccaggc
tatcagctgcaacaaaatggttcctttggaccaacccggggccctcagtccaattatgga
agtccctacccaggagcagccgcttttggaagtcagcctgggcctcctcaaccattgcct
gctaagcgcctggaccctgatgccatcccgagccctcaactcaatgagctgcctcctcag
cagaaaaccagacacagaatagaccctgatgccattcctagtccaattcaggttattgag
gatgacaggaacaaccggggttcagagccatttgttactggagtgcggggccaggtgcca
cccttagtcaccaccaacttccttgtgaaagaccaagggaatgcaagtccccgatacatc
cgatgcacatcctataatatcccttgcacatctgacatggctaagcaggctcaggtgccc
ctagcagctgtcatcaagccgctggcaaggctgcccccagaagaggcttcaccatatgtt
gtcgaccacggggaatctggccctttgcgctgcaatcgctgcaaagcatacatgtgccct
ttcatgcagttcgttgagggagggaggcgcttccagtgctgcttttgcagctgtatcaac
gatgttcccccccagtattttcaacatctggatcataccggcaaacgtgtggatgcttat
gaccgtcctgagctgtccctgggttcttatgaattcttggccactgtagattactgcaag
aacaataagttccccagccctcctgccttcatcttcatgattgacgtctcctacaatgcc
atcaggagtggtcttgttaggctcctctgtgaggagctcaagtcattgttagacttcctg
cctagggagggcggggcagaagaatcagcaatccgcgttggctttgtcacctataataag
gtgctccacttctacaatgtgaagagctcattggcccagccacaaatgatggttgtatct
gatgtgggtgacatgtttgtgccactgctggatggcttcctggtcaatgtcaatgagtct
caagcagtcatcaccagcttattggatcagattccagaaatgtttgcagacacaagggag
acagagacagtatttgccccagttatccaggctgggatggaggctctgaaggctgctgag
tgtgcagggaagctctttctgttccacacctccctgcccattgcagaggccccagggaaa
ctgaagaacagagacgacaggaagttgatcaacacagacaaggagaagactctgttccag
cctcagacaggtgcctatcagaccctggccaaagagtgtgtggcccaaggctgctgcgta
gacctcttcctcttccctaaccagtatgtggatgtggccacgctctctgttgtaccccag
ctcactggtggctctgtctataaatacgcttgctttcaggtggaaaatgaccaggaacgg
ttcctgagtgacctgcgtcgggatgtacagaaggtcgttggctttgatgctgtgatgcgg
gtccggacaagcactggtatccgtgctgtagatttctttggggctttctacatgaacaac
acaacagatgtggagctggctgggctggatggggacaagacggtgactgtggagttcaag
catgacgatcggctcaatgaagagaatggagccctcctgcagtgtgccctgctctacacc
agctgtgcagggcagcgacggctccgcatccacaacctggccctcaactgctgcactcag
ctggctgatctgtatcgaaactgtgagactgacacgctcatcaactacatggccaagttt
gcataccggggggtcctgagcagccctgtgaagactgttcgtgacactcttatcactcag
tgtgcccagatcttggcctgttacagaaagaactgtgccagcccctcctctgcaggacag
ttgatccttcctgagtgcatgaagctactcccagtttacctgaactgtgtattgaagagt
gatgtcctgcagcctggagctgaagtcactactgatgaccgggcctacgtccgacagctg
gttacctccatggatgtggctgagaccaatgtcttcttctatcctcggctcctaccgttg
acaaagtctcccattgagaataccactgaaccaccagcagttcgagcatctgaagagcgt
ctaagcaacggggatatatatttgctggagaatgggctcaacctcttcctctgggtggga
gcaagtgtccaacagggtgttgtccagagcctcttcggtgtctcctccttcagtcagatc
accagtggcttgagtgttctgccagttctggataatctactgtccaagaaggtgcaaggc
ctcattgacagtttgagggcacagagatcgcggtacatgaagcttattgtggtgaaacaa
gaggacaagctggagacactgttcaaacacttcctggtggaagacaagagcctgagcggc
ggagcatcctacgtggactttctctgtcatatgcacaaggagattcggcagctactgagc
tag
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