Phocoena sinus (vaquita): 116742030
Help
Entry
116742030 CDS
T07759
Symbol
PRF1
Name
(RefSeq) perforin-1
KO
K07818
perforin 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04210
Apoptosis
psiu04650
Natural killer cell mediated cytotoxicity
psiu04940
Type I diabetes mellitus
psiu05320
Autoimmune thyroid disease
psiu05330
Allograft rejection
psiu05332
Graft-versus-host disease
psiu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116742030 (PRF1)
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
116742030 (PRF1)
09160 Human Diseases
09163 Immune disease
05320 Autoimmune thyroid disease
116742030 (PRF1)
05330 Allograft rejection
116742030 (PRF1)
05332 Graft-versus-host disease
116742030 (PRF1)
09166 Cardiovascular disease
05416 Viral myocarditis
116742030 (PRF1)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
116742030 (PRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
116742030
NCBI-ProteinID:
XP_032465188
Ensembl:
ENSPSNG00000020654
UniProt:
A0A8C9CQ02
LinkDB
All DBs
Position
16:complement(22825563..22832293)
Genome browser
AA seq
555 aa
AA seq
DB search
MASRALLPSVLLLLLPAPTPAPCYTAARSECRRNLKFVPGSWLAGEGVDVTSLRRSGSFP
VDTQRFLRPDGTCTLCRNALQQGAVQRLPLALTDWRAQGLGCNRKVVKGEGRSTEEVAGA
AANSIRNDWKVGLDMTPKPSSNVHVTMAGSHSREANFAAQKTHQDQYRFSLDSVECRFYS
FHLVHTPPLHPEFKRALKSLPPHFNISTELHYRRLISSYGTHFIRSMELGGRISALTALR
TCELALEGLTAQEVEDCLAVEAEVSIRSHASASLAFKACEEKKKQHKMGTSFHQAYRERC
SDVVGGHHTSMHDLLFGNQASPEQFSAWVTSLQDSPGLVDYTLEPLHVLLDSHDPRREAL
RQAVSTYVTDRARWRDCSRPCPPGQRKNPKDPCQCLCHGSAATNQDCCPRKRGLARLEVM
NFVATGLWGDWTTATDAYLKVFFGGQELRTDTVQNNNDPRWMTRLDFGDVVLTTGGPLRV
QVWDADYGWDDDLLGTCDQTPKSGSHEVKCHLKHGHLRFSYHAKCLPHLAGGTCLEYAPQ
GLLGEPPGNRSGPVW
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgagcgctcctccccagcgtcctcctcctgcttctgcccgcacccacccct
gccccctgctacacggccgcacgctctgagtgccggcgcaacctcaagttcgtgcccggc
tcctggctggcaggggagggcgtggatgtgaccagcctccggcgctcaggctccttcccg
gtggacacacagcgcttcctgcggcccgacggcacctgcaccctctgccgcaacgccctg
cagcagggcgccgtccagcgactgcccctggcgctcaccgactggcgcgcccagggcttg
ggctgcaaccgcaaagtggtcaagggtgagggtcgctccaccgaggaggtggctggggcg
gcggccaacagcatccgtaacgactggaaggtggggctggacatgactcccaagcccagc
agcaacgtgcacgtgaccatggcgggctcacactcccgggaagccaacttcgcggcccag
aagactcaccaggaccagtaccgcttcagcctggactcagtggagtgtcgcttctacagt
ttccacctggtgcacactcccccactgcaccctgagttcaagagggccctcaagtccctt
cccccccacttcaacatctccaccgagcttcactaccggaggctcatctccagctatggc
acccacttcatccggtccatggagctgggcggccgcatctcggccctcaccgccctgcgc
acctgcgagctggccctggaagggctcacggcccaggaggttgaggactgcctggccgtc
gaggccgaggtcagcataagaagccacgccagtgcctcgttggcattcaaggcgtgtgag
gagaagaagaaacagcacaagatggggacctccttccaccaggcctaccgggaacgctgt
tctgatgttgttggcggccaccacacgtccatgcatgacctgctgttcgggaaccaggcc
agccccgagcagttctcagcctgggtgacctcgttgcaggacagccccggcctggtggac
tacacgctagagcctctccacgtgctcctggacagccatgacccgcggcgggaggcgctc
aggcaggctgtgagcacgtacgtgacggacagggcacgctggagggactgcagccgcccg
tgccccccggggcagcgcaagaaccctaaggacccgtgccagtgcctgtgccatggctcg
gcggccaccaaccaggactgctgtcccaggaagaggggcctggcccgcctggaggtcatg
aacttcgtggcgacgggtctgtggggagactggaccactgccacggacgcctacctgaag
gtcttcttcggcggccaggagctgaggaccgacacagtgcagaacaataacgaccccagg
tggatgacacggctggacttcggggatgtggtcctgaccacagggggccccctgagggtg
caggtctgggatgcagactatggctgggacgatgaccttctcggtacctgtgaccagact
ccaaagtctggctcacacgaggtgaagtgccacctgaagcatggtcacctgagattctcc
taccacgctaagtgcttgcctcacctggcaggggggacatgcctggagtatgccccccaa
gggcttctgggggagcctccaggaaaccggagtgggccagtgtggtga
DBGET
integrated database retrieval system