Phocoena sinus (vaquita): 116742142 Help Entry 116742142         CDS       T07759                                  Symbol RP1 Name (RefSeq) oxygen-regulated protein 1   KO K19538   retinitis pigmentosa 1 Organism psiu  Phocoena sinus (vaquita) Brite KEGG Orthology (KO) [BR:psiu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:psiu03037]     116742142 (RP1)    04812 Cytoskeleton proteins [BR:psiu04812]     116742142 (RP1) Cilium and associated proteins [BR:psiu03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    116742142 (RP1) Cytoskeleton proteins [BR:psiu04812]  Eukaryotic cytoskeleton proteins   Microtubules    Tubulin-binding proteins     Microtubule-associated proteins (MAPs)      116742142 (RP1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DCX Motif Other DBs NCBI-GeneID:  116742142 NCBI-ProteinID:  XP_032465255 Ensembl:  ENSPSNG00000011554 UniProt:  A0A8C9C1T1 LinkDB All DBs Position 17:3724251..3733470 Genome browser AA seq 2142 aa AA seqDB search MSETPSTSFSMIRRISSEGQVPSRQLGVTQPVVAKRISFYKSGDPQFGGVRVVLNPRSFK TLDALLDNLSGKVPLPFGVRNISTPRGRHSITRLEELEDGQSYLCSHGRKMQPVDLEKAR QRPRPWLSSRALSAHAQRARAAAASAAPAVPGMLRAPRRLVVFGNGDPKTRRAVLLSRRV MQSFEVFLQHLTEVMQRPVTKLYATDGRKVPSLQAVILSSGAVVAAGREPFKPGNYDIQK YLLPARVPGIISHRVYPKGNARSESRKMSTHVPSSPRSQIYSVSSDKMQSNDCYSDHSFA SENYLALEKNDSQNLLIYPSEDDVEKSIIFNQDGTMTVEMKVRFKIKEEETIKWTTTVCR ADLSNNDEKSEISSFPGRTDDGSSGLKITACSLSADVSPLEKGSIQEGSLVEEINSPVRD QDTETCNSASWENAAMDTAATQGTQDQAKHHFYRPPTPGPRRVRQKKSVIGSVTLVSETE VQEKMIGQFSYSEERKDGENKSEYHMFTHSCSKMSSVSNRPVLLQVDNNEQIESSLERKK ESRLLKSNALSAGVVEITSQKMLEMSHNNGLPQTTSENSVVEEGIVDSVTADNKTSVKNL RTYGNTNDRSSPFLADATHSSGNNSGTDKTISETPASVGSSTVTTRIDKLISEFSQCGLT KLPENEKQISSSVASKKKMTSQQPVINSKHQGGEIARKGIPRKSKRINTRGRIAQETILQ DSRSPLKGEVLCEKDLHASDTVIESNYFSSKSNNAVNSRNLPRNKLNTIHNPKVQGLLAK RKSRPLNKVNLGGPTKGEIGQGEKVFSHNEFRYCKNTFENQNLFHMFNFLEQKPDAFCGP QAQAEIASWYLRGASKKSLVSKVNNSHITLRSQKKQKGDRLKSDTIVSKQHVTTRANSLA SLKKAVFPEAVTHHSVQNYVQRWLQNISSDSALQPRQSAPICTKERSVVGYNNSCFPRNN SHKSSGKGDNFVLEGNKHITENASLTGDNLGKEVGTSFDKDNSEELSKDLYGSQVESLKD AYLLSIHEYRTLSQSAIDDANTKSQVSAEKSGQEVSLVYRDINLATKGQSVEAAIQVDLM EEDTPKHPLPVWLLRQLQALVPSSHKTQNGVVQMPGSLADIPFPSPIYNSSTNVLLAWLL VLNLKGGMNSFCRGDAHKTTSRTSEILALLEVLKHIAVKEEADDLKAAVASLVESTTNHF GLTEKEQDMVPIDLSANCSTPNIQIAPKCIENEKTQKISSLDGGCSASEDSVSEVCVSEG PCSPCEMCIVNKTYPPKETWNLSDNSFPSDGCTTDQTSMNKACFLGEVSSLTDPVSSHKP CAYEENRICEMACSVDEAYIPIKVCNTSDFLNSKENTYTDNLELTEELERVGEVQKDLNI LADPGCKHGFSILVSHQNVSNLSHSGFFQDATEPELHRKHSSLDEFKNCSLKKFQDENAY TSFDKEDSKTSEEPGSITNSMTSSERNISELESSEELENQNTDIFNTKVNSGEQATEELI QKELEASKNLELIKVSSRNITEEEGRNGVICETISRRLATPPSLVFCYDSKQNTEKQLIE GETEMRVKKMVESMETGSFSESLLNFKNDFKRSGTSDWSDYRQDSENEQSYKTSSDGPSD GGEEVAQEKDYNKGFVKRTIEKLYGKAEIMKPSFFSGSTHTSQVCPYDSMEFQGAGKVGI YDSEGQSFGSSEQVSSNSAVLQKFQEERRDKCDFNNVRASYHGDDIVEHGTEQNGHNRIP RDMEEGVLIDKGKWLLKENHLLRVSSLENSGMCGNADTTSVDTLLDDNSSEVPYSHFGNL APGPNMAELSSSELEELTQPPELRCSYFNMPHCSDSEPFREDLLDVQNKTRSQERVPNHH AEEKCNHRSERVCTSVTHVFTSAGNKVHPVSDDTIKNQPLPGNNVIHGALQEGDSLDKLY NICGQHCPILPVINQPVNEEHRGFAYCKDSDIENSLSLQLWMKIHACLLQSDKNVFRDKN NKASSNKAFIDNAIGSTFDWLYFNSTFDLMDKRRKLKRINFLGLEEGNNLNKFQSYLKNF LHTLLLVGGPVNSNIQDPGNQTNEIFEVVDENNNVLDNRFQNSRTNLNQVVRDNNYHCSC EMLGQACLFCQVEASLDISNRSTLEIFYIFEGENLFIWEEEN NT seq 6429 nt NT seq  +upstreamnt  +downstreamnt atgagtgaaactccttccaccagtttttccatgattcgtcggatttcttctgaaggtcag gttccttctcgccagttgggcgtcactcagcctgtcgtggccaaaaggatcagcttctac aagagcggagacccgcaatttggcggcgtccgggtggtgctgaaccctcgttctttcaag acattggatgctctgctggataatttgtcggggaaggtgcccctacccttcggggtgagg aacatcagcaccccccgaggaaggcacagcatcacgcgcctggaggagctggaggatggc cagtcgtacctgtgctcccatggcaggaagatgcaaccggtggacctggaaaaggcccgc cagcgcccgcgtccctggctcagcagccgggccctcagcgcgcacgcgcagcgcgcacgc gccgccgccgcttccgccgctcccgccgttcccggcatgctgcgcgcgccgcggcggcta gtggtcttcgggaatggcgacccgaagacgagacgtgcggtcctcctgagcaggagggtc atgcagagctttgaggtgtttctgcagcacctgaccgaggtcatgcagcgcccggtgacc aagctctacgccacggacggaaggaaggttcccagtctccaggctgtgatcctgagctct ggagctgtggtggcagcaggaagggagccatttaaaccaggaaattatgacatccaaaag tacttgcttcctgctagagtaccggggataatctctcaccgtgtgtaccccaagggaaat gctaggtcagaaagcagaaaaatgagcacacatgtaccttcaagcccaaggtctcaaatt tattctgtttcttctgacaaaatgcagagtaatgattgctactcagaccattcttttgct tctgaaaattacttggccttagaaaaaaatgattctcagaatttattgatatatccttct gaagatgatgttgagaaatcaattatttttaatcaagatggtactatgacagttgagatg aaagttcgattcaagataaaagaggaggaaaccataaaatggacaaccactgtctgtaga gctgatctttctaataatgatgaaaagagtgagataagcagtttcccaggaagaacagat gatgggtcatctggtttaaagattacagcatgttcattgtctgcagatgtctcacctctg gagaaaggcagtattcaagagggcagtttggtggaggagatcaacagtccagtgagagat caggatactgaaacgtgcaattctgctagttgggagaatgctgctatggacacagctgcc acccagggaactcaggatcaagcgaaacatcatttttataggccccctacacctggacca aggagagtcaggcaaaagaaatctgtgatagggagtgtgaccttagtatctgaaactgaa gtacaagagaaaatgattgggcagttttcctatagtgaagaaaggaaagatggggaaaac aaatctgagtatcacatgttcacacattcttgcagtaaaatgtcatcagtatccaacaga ccagtacttcttcaagttgataacaatgagcagatagagtcatctttagaaagaaaaaag gaaagcagactgctcaaatcaaacgcactaagtgctggtgttgtagaaattacaagtcag aagatgttagagatgtcgcataataatggcttgccacagactacatcagaaaactcagtt gtggaggaaggtatagttgatagtgtaacagcggacaacaaaactagtgtcaagaattta agaacttatggtaacaccaacgatagatccagtccttttttagcagatgcaactcattct tcaggtaacaactctggaactgacaaaactatttcagagaccccagcttcagtaggatcc tctactgtcaccacaagaattgacaaactaattagtgagttttctcagtgtggtttaaca aaacttccagaaaacgaaaagcagatttcatcatctgttgccagcaaaaagaagatgaca tctcagcagcctgtgataaattccaagcatcagggtggggagattgcaaggaaaggaatc cccaggaagagtaaaagaataaacacaagaggtagaattgcacaggaaaccatactgcaa gattcacgtagtccccttaaaggagaggtactttgtgagaaagacctccatgcaagtgat acggtaattgaatcaaattatttttcttccaaaagtaataatgctgtgaattccaggaat ctccctagaaataaattaaatactattcataatcctaaggttcagggacttttagccaaa agaaaatccagaccactaaacaaagtaaacttaggaggacctacaaaaggagaaattggt caaggagaaaaagtgttctcccataatgaatttagatattgcaaaaatacttttgaaaat caaaatttatttcatatgtttaactttcttgagcagaaacccgatgctttttgtggtcca caggctcaagcagaaatagcatcttggtatttgagaggagcgtcaaagaagagtttagtt tcaaaagttaataattcacacataactttaagaagccagaaaaaacaaaaaggggatagg ttgaaatcagatactattgtaagtaaacaacatgtcacaaccagggcaaattccttagct tctttgaaaaaagctgtttttcctgaggctgttacccatcattcagttcaaaattatgta cagagatggttgcagaacataagttcagattcagctttgcaacctagacagtcagctcca atatgcacaaaggaaaggagtgtggtaggctataataacagttgttttccaagaaataat tcccacaaaagttctggaaaaggagataattttgtcctggaaggtaataaacatataact gaaaatgccagtttgacaggagataacctagggaaagaggtcggcacatcttttgacaaa gataacagtgaagaacttagcaaagatctctatgggagccaggttgaatctctgaaggat gcttacttgctttccatccatgagtatcgcactttgtcacagtcagctattgatgatgct aatactaaaagtcaggtatctgctgaaaagtcaggacaagaggtaagccttgtttacaga gacataaacctagctacaaaagggcaaagtgtagaggctgccattcaagtagatcttatg gaagaggacactccaaaacacccgttaccagtctggttgcttcgccaactgcaagcttta gttcctagtagtcacaagactcagaatggagttgttcaaatgccaggttcacttgcagac attccctttccttctccgatatataattcatccactaatgttcttctggcttggctcctg gtgctaaacctaaagggaggtatgaatagcttctgtcgaggtgatgctcacaagactacc agcagaacttcagaaatacttgcattgttggaggttctgaagcacattgctgtcaaagag gaagcagatgacttgaaggctgctgttgccagtttagtggaatcaaccacaaatcacttt ggactcactgagaaagagcaggacatggttccaatagatctttctgcaaattgttctaca cccaacattcagatagctcctaaatgcattgaaaatgagaaaacacagaaaatctcctct ttagatggaggctgttctgccagtgaggacagtgtctctgaagtctgtgtttcagagggg ccttgctctccatgtgagatgtgcattgtgaataagacttatcctccaaaagagacttgg aacctcagtgataattctttccccagtgatggctgtaccacggatcagacctccatgaat aaggcttgtttcctaggagaggtctcttcacttactgaccctgtgtcttctcataagcct tgtgcttatgaggaaaaccgtatctgtgagatggcttgctcagttgatgaggcctacatt cccatcaaagtctgtaataccagtgactttttaaattccaaggaaaacacatatactgat aatttggaattgaccgaagagttagaaagagttggtgaagttcagaaagacctaaatatt ttggcagaccctgggtgtaaacatggctttagtatattggtgtcacaccaaaatgtcagt aatttaagccacagtggctttttccaagatgcaactgaaccagaacttcataggaaacat agttccctagatgagtttaaaaattgttcattaaagaaatttcaggatgaaaatgcatat acatcttttgataaggaagactcaaagacttctgaagaaccaggctcaataaccaacagc atgacatcaagtgaaagaaacatttcagaattggaatcttctgaagaattagaaaaccag aacactgatatctttaatacaaaggtaaattcaggagagcaagctactgaagaattgatc caaaaggaattagaggctagtaaaaatttggaattgatcaaagtctctagcaggaacatt acagaagaagaaggaaggaatggtgtcatttgtgagacaatcagtaggaggctggcaaca ccaccatctttagtattttgctatgattctaagcaaaatactgaaaagcagctcattgaa ggagaaactgaaatgagagtaaaaaagatggtggaaagcatggagactggaagtttttca gagtctctccttaattttaaaaatgacttcaaaaggtcagggacttctgattggtcagat tatagacaagacagtgagaatgaacagtcatataaaacatccagtgatggccccagtgac ggtggtgaggaggtggcccaagagaaagactataataaaggatttgttaaaaggacaata gaaaaactttatggtaaagcagagattatgaaaccgtcttttttctctgggtctacacat acatctcaggtttgtccttatgattctatggaatttcagggtgctgggaaagtaggtatt tatgactctgaaggtcagtcatttggctcttctgaacaggtatctagtaattcagctgtg ttgcagaaatttcaggaggaaaggcgagataaatgtgattttaataatgtgagggccagt taccatggggacgacattgtggaacatggtactgaacaaaatggtcataacagaattccc agagacatggaagagggggtactgattgacaagggcaagtggctcctgaaagaaaatcat ttgctaagagtgtcatctcttgaaaattctggcatgtgtggcaatgcagacaccacatca gtggatactctacttgatgataacagcagtgaggtaccgtattcacatttcggaaatttg gccccaggcccaaacatggctgaactctcctcttcagaattggaggaactgactcaacct cctgaactgagatgcagttattttaacatgcctcattgtagcgactctgagccttttcgc gaggatttgctggatgttcaaaataaaactcgttctcaggagagagtaccaaaccaccat gcagaagagaagtgtaatcataggtcagagagagtatgcacatctgtcactcatgtcttc acatctgctggtaacaaagtgcatcctgtctctgatgatactattaaaaaccaaccattg cctggtaataatgtaattcacggtgcacttcaggaaggtgactctttggataaactctat aatatttgtggtcaacattgcccaatactacctgttattaaccagcctgtaaatgaggaa caccgaggatttgcatattgcaaagattctgatattgaaaattctttgagtctccaatta tggatgaaaatacacgcatgtttactacagtcagacaaaaacgtgttcagagataagaac aataaagcaagtagtaataaagcatttattgataatgccattggcagtacatttgattgg ctttattttaatagcacatttgacctgatggataaaaggagaaaattaaaaagaattaac ttcttgggcttagaggaaggaaataatttaaataagtttcagtcatatttaaagaatttc ttgcacacattgttgctagttgggggtcctgtgaattcaaatatacaagaccccggaaat cagacaaatgaaatctttgaagtagttgatgagaataacaacgtcctagataacagattc cagaactcaagaacaaatctcaaccaagtagtaagagacaataactatcattgctcctgt gaaatgcttggccaagcctgcctattctgccaagttgaggcatccttagatatcagcaac agaagcacattagaaatattttatatttttgaaggtgaaaatcttttcatttgggaagag gaaaactaa

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