Phocoena sinus (vaquita): 116742161
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Entry
116742161 CDS
T07759
Symbol
NCOA2
Name
(RefSeq) nuclear receptor coactivator 2 isoform X1
KO
K11255
nuclear receptor coactivator 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04915
Estrogen signaling pathway
psiu04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
116742161 (NCOA2)
04919 Thyroid hormone signaling pathway
116742161 (NCOA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116742161 (NCOA2)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
116742161 (NCOA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NCOA
NCOA_u2
PAS_11
DUF4927
Nuc_rec_co-act
DUF1518
SRC-1
PAS_3
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
116742161
NCBI-ProteinID:
XP_032465292
Ensembl:
ENSPSNG00000020190
UniProt:
A0A8C9CQC5
LinkDB
All DBs
Position
17:complement(15030273..15301805)
Genome browser
AA seq
1464 aa
AA seq
DB search
MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFANFNDI
DNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMML
EALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSI
VNGGAWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHENQEAHQKYETMQCFAVSQPKSIKE
EGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGWEDLV
RRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQT
TNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQAMCSGNPGQDMTLS
SNINFPMNGPKEQMGMPMGRFGGSGGMNHVSSMQATTPQGSNYALKMNSPSQSSPGLNPG
QPSSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNALQAL
SEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGPAGPA
ESSCHPGEQKDAGEAGLPQAGSGERPDGQGRLHDGKGQTKLLQLLTTKSDQMEPSPLPGA
LSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELNQEAS
STAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPASNTK
LITMKAEKEEMSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPSAPAGSVDKQAII
NDLMQLTAESSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSPTGAG
PFPPIRNNSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGSNAARPTLPSGEWAPQSSA
VRVTCAATTSAMNRPIQGGMIRNPTASIPMRPNSQPGQRQMLQPQVMNIGPSELEMNIGG
PQYSQQQAPPNQTAPWPESILPIEQAPFASQNRQPFGNSPDDLLCPHPAAESPSDEGALL
DQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFPSQDSNILLEQKAPVFPQQYASQ
AQMAQGSYTAMQDPSFHTMGQRPSYATLRVQPRPGLRPTGLAQTQPNQLRLQLQHRLQAQ
QNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQQVQQ
RALMMRGQGLNMTPSVVAPSGVPATMSSPRVPQANAQQFPFPPSYGISQQPDPGFAGATA
PQSPLMSPRLAHTQSPMLQQSQANPAYQASSDMNGWAQGSMGANSMFSQQSPPHFGQQAN
TSMYNNNMNINVSMATNTGGMSNMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPALRGG
SLFPSQLPGMDMIKQEGDAPRKYC
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggatgggagaaaatacctctgacccatccagggcagagacaagaaagcgtaag
gaatgtcctgaccaacttggacccagccccaagaggagcactgagaaacgtaatcgtgaa
caggaaaataaatatattgaagaacttgcagagctgatttttgctaattttaacgatata
gacaactttaacttcaaacctgacaaatgtgcaatcttaaaagaaactgtgaagcaaatt
cgtcagatcaaagaacaagagaaagcagcagccgccaacatagatgaagtgcagaagtca
gacgtgtcatccaccgggcagggtgtcatcgacaaggatgcactagggcctatgatgctt
gaggcccttgatgggttcttctttgtagtgaacctggaaggcaacgttgtgtttgtttca
gagaatgtgacacagtacctaaggtataaccaggaagagctgatgaacaaaagcgtatat
agcatcctgcatgttggggaccacactgaattcgtcaaaaacctgctgccaaagtccata
gtgaacgggggagcttggtctggcgaacctcccaggcggaacagccatactttcaattgt
cggatgctggtaaaacctttacctgattcagaagaggaaggtcatgaaaaccaggaagca
catcagaaatatgaaactatgcagtgctttgctgtctctcaaccaaagtccatcaaagaa
gaaggagaagatttgcagtcctgcctgatttgtgtggccagaagagtccccatgaaggag
agaccagttcttccctcatcagaaagtttcactactcgccaagatctccaaggcaagatc
acgtccctggacaccagcaccatgcgggcagccatgaagccgggctgggaggacctggtg
aggaggtgcatccagaagttccacgcgcagcacgaaggggagtctgtgtcttatgctaag
aggcatcaccatgaagtgctgagacagggattggcattcagtcagatctatcgtttttcc
ttgtccgacggcactcttgtggctgcacaaacgaagagcaagctcatccgttctcagact
actaacgaacctcagcttgtgatatctttacatatgctgcacagagagcagaatgtgtgt
gtaatgaatccggatctgactggacaagcgatgggaaagccattgaatccaattagctct
agcagccctgcccatcaggccatgtgcagtgggaacccaggtcaggacatgaccctaagt
agcaatataaatttccccatgaacggcccaaaggaacaaatgggcatgcccatgggcagg
tttggtggttccgggggaatgaaccacgtgtcgagcatgcaggcaaccactcctcagggt
agtaactatgcactcaaaatgaacagcccctcacaaagcagcccgggcctgaatccagga
cagcccagctccatgctctcaccgaggcatcgcatgagccctggggtggccggaagccct
cgaatcccccccagtcagttttcccccgcaggaagcttgcattcccccgtgggagtttgc
agcagcacaggaaatagccatagctacaccaacagttccctcaacgcactgcaggccctc
agcgaggggcacggggtctcactggggtcgtcgctggcttcaccggacctcaaaatgggc
aacttgcaaaactccccggtgaatatgaatcctcccccgctcagcaagatgggaagctta
gactccaaagactgtttcggactttacggggagccctcggaaggtccagccgggccagca
gagagcagctgccacccgggggagcagaaggatgccggcgaggccggcctgccccaggcc
gggagcggcgagaggcctgacgggcagggcagactgcatgacggcaaggggcagaccaaa
ctcctgcagctgctaaccaccaaatccgaccagatggagccttcgcccttgcctggcgct
ctgtcggacaccaacaaggactccacaggcagcttgcctggctctgggtcgacgcacgga
acctcgctcaaggagaagcataagattttgcacagactcctgcaggacagcagttccccc
gtggacttggcgaagctgacagcagaagccacgggcaaagagctgaaccaggaggccagc
agcacagctcctgggtccgaggtgactattaagcaggagccagtgagccccaagaagaaa
gagaatgcactgcttcgctacctgctcgataaggatgatactaaagacatcggcttacca
gaaatcacccccaaactggagcgactggacagtaagacagaccctgccagtaacacgaaa
ttaatcactatgaaagccgagaaggaggagatgagctttgagcccagtgaccagcctggc
agtgagctggacaacttggaggagattttggatgatttgcagaatagtcaattaccacag
cttttcccagacacgaggccaagcgcccctgctggatcagttgacaagcaagccatcatc
aatgacctcatgcaactcacagccgagagcagccctgttacacctgttggagcccagaaa
acagcattgcgaatttcacagagcacttttaataacccacgaccagggcaactgggcagg
ttattgccaaaccagaatttaccacttgacatcacattgcaaagcccaactggtgctgga
cctttcccaccaatcagaaacaatagtccctactcagtgatacctcagccaggaatgatg
ggtaatcaagggatgataggaaaccaaggaaatttagggaacagtagcacaggcatgatt
ggtagtaatgctgcccggcccaccctgccatctggggaatgggcacctcagagttctgct
gtgagagtcacctgtgctgctaccaccagtgccatgaaccggccgatccaaggaggtatg
attcggaacccaacagccagcatccccatgagacccaacagccagcctggccaaagacag
atgcttcagcctcaggtcatgaatatagggccatctgaattagagatgaacataggggga
cctcagtatagccaacaacaagcgcctccaaatcagaccgccccctggcctgagagcatc
ctgccgatagaacaggcaccgtttgccagccagaacaggcagccgtttggcaactctcca
gatgacttgctgtgtccacaccctgcagcggagtctccaagtgacgaaggcgctctcctg
gaccagctgtacttggccttgcggaacttcgatggcctggaggagatcgacagagctctg
gggatacccgagctggtcagccagagccaagcggtggatccagagcagttcccaagtcag
gattccaacatcctgctggagcagaaggcccccgtgttcccacagcagtatgcatctcag
gcacaaatggcccaaggcagctacactgccatgcaggatccaagcttccacaccatgggg
cagcggccgagctacgccacgctccgtgtgcagcccagacccggcctcaggcccacaggc
ctggcgcagacccagcccaaccagctgaggcttcagctgcagcatcgcctccaagcacag
cagaatcgccagccactcatgaatcaaatcagcaatgtttcaaacgtgaacctgactctg
aggcctggagtgcccacacaggcacctattaacgcacagatgctggcccagagacagagg
gagatcctgaaccagcatcttcgacagagacagatgcatcagcagcagcaagttcagcag
cgagctctgatgatgagaggacaggggctgaacatgacgcccagcgtggtggctcctagc
ggtgtgccggcaactatgagcagcccccgggtcccccaggcaaatgcacagcagtttccc
ttccctccgagctacggaataagtcagcagcctgatccaggctttgctggggccaccgca
ccccaaagccctctgatgtcgccccggctggcgcacacgcagagccccatgctgcagcag
tcccaggcgaacccagcctaccaggcctcctcggacatgaacgggtgggcgcaggggagc
atgggcgcaaacagcatgttttcgcagcagtcccctccacacttcggacagcaagcaaac
accagcatgtacaataacaatatgaacatcaatgtatccatggcgaccaacacaggtggg
atgagcaacatgaaccagatgactggacagatcagcatgacctcagtgacctccgtgcct
acgtcagggctgtcctccatgggtcccgagcaggttaacgatcctgctctcagaggaggc
agccttttcccaagccagctgcctggaatggatatgattaagcaggagggagacgcacca
cggaaatactgctga
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integrated database retrieval system
