Phocoena sinus (vaquita): 116742315
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Entry
116742315 CDS
T07759
Symbol
RBM12B
Name
(RefSeq) RNA-binding protein 12B
KO
K24526
RNA-binding protein 12
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116742315 (RBM12B)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116742315 (RBM12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
116742315
NCBI-ProteinID:
XP_032465625
Ensembl:
ENSPSNG00000011643
UniProt:
A0A8C9E3V9
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All DBs
Position
17:complement(37773878..37785236)
Genome browser
AA seq
994 aa
AA seq
DB search
MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFATDEDARRAISRS
GGFIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGAPGVGSLSNFVEAIKEEASNS
GYGSPINQDAGFHTNGTGQGDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV
DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNA
VKEGDISMRTEEHSPPRGINDRHFWKRSHSKSPRRTRSRSPLGFYVHLKNLSLSINKRDL
RNFFRDTDLTNEQIRFLYKDERRTRYAFVMFKTLKDYNTALGLHKTVLQYRPVHIDPVSR
KQMLKFIDCYEKKRPASTEKERLGHVSQKYSQEGYSGQKLCIYIRNFPFDVTKVEVQKFF
ADFSLAEDDIYLLYDDKGVGLGEALVKFRSEEQAMKAERLNRRRFLGTEVLLRLISEVQM
REFGVNFSSMSSERMHDHSQSCDRDDHSHSFDSNDLPLYSVGPSENFRHQQEDLRQLDNF
KHPQGDFRPPERRPPEDFRHSPEDFRHSPEDFRHLREEHFRRPPEEDFRRSWEEDLRHSP
EEDFRHSREEDWRRPPEEDFRRPPKEDFRRPPEEDWRRAPQGDFRRPPEEDWRRPPEEDF
RRLPPGEWRRPPEEDFRRPPEEDFRRLPEEDFRRPPEEDFRRPHEEDFRRSPEEDFRRSP
EKDFRRPPAEHFRRPPLEHFRRPPPEHFRRPPQEHFRRPPPEHFRRPPQEHFRRPPQEHF
RRPSQEHFRRPREEDFRHSLDEDFRGPPDEDFRHPPDEDFRNPQEEDFRSPSDEDFRRLP
EEDLREAPEEDPRLTDSFRLPGEEFRSPPDDFRSHRPFVNFGRPEGGKFDFGKRNMGSFP
EGRFMPDPKLNCNSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYNEQGLPTG
EAIVAMINYNEAMAAIKDLNDRPVGPRKVKLILL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagtcatccgtttactggggcttccttttattgcggggcctgtggatattcgt
cacttcttcacgggattgactattcctgatggaggagtgcatataattggaggggaagtt
ggggaggcttttattatctttgcaacagatgaagatgcaagacgtgccataagtcgttca
ggagggtttatcaaggattcatctgtagagctttttcttagtagtaaggcagaaatgcag
aagactatagaaatgaaaagaactgatcgcatgggaagagagagaccaggatctggggca
ccaggggttggcagcttatctaattttgttgaggctattaaagaagaagcaagtaattct
ggatatggctctccgattaatcaagatgctgggtttcatactaatggtacaggacaaggt
gatttaaggccaagaaagacacgaccattgaaggcagagaatccttacttgtttctacga
ggcttgccttacttagtaaacgaagatgatgtacgtgtctttttctctggtttgtgtgtg
gatggagtaattttcttaaagcatcatgatggccgaaataatggtgatgccatagtaaaa
tttgcttcatgtatcgatgcttcaggaggtcttaaatgtcatagaagttttatgggttca
agatttattgaagtaatgcaaggctcggaacaacagtggattgagtttggaggtaatgca
gttaaggagggtgacatttctatgaggactgaagaacattctccaccaagaggaattaat
gatagacatttttggaaacgatctcattcaaaatctcccagaagaacacgttctcgttct
cctcttggattttatgttcacttaaaaaatctgtccctaagtattaacaaaagagattta
agaaatttctttagagatactgatctgactaatgaacagattaggtttttatataaggat
gaaagaagaacaagatatgcctttgtgatgttcaagactctgaaagactataacactgct
ctgggtttacataagactgttttacagtatcgtccagttcatattgatccagtttctaga
aaacagatgctgaagttcattgactgttatgaaaagaaaagaccagcgtcaacagagaaa
gagaggcttggacacgtttcacaaaaatactctcaagaaggctattctggccagaaactg
tgcatatatataagaaattttccatttgatgttacaaaagttgaagtgcagaagttcttt
gcagacttttctcttgctgaggatgacatttacttgctttatgatgacaaaggagttggt
ctaggagaagcattggtgaaattcagatcagaagaacaggccatgaaagctgaacgttta
aaccgacgaagattcttggggacagaggtattgttaaggctcatatctgaggtacaaatg
cgggagtttggtgtaaatttttcttcaatgtccagtgagagaatgcatgaccattcacag
tcatgtgacagagatgatcattcccattcatttgactcaaatgatctaccattatactcg
gttggcccttctgaaaactttaggcatcagcaggaggacttgaggcaactggacaatttc
aagcatccccagggggatttccgacctcctgaaaggcgccctccagaagactttaggcat
tccccagaggatttcaggcactcccctgaagacttcaggcaccttcgggaggaacacttc
aggcggcctcctgaggaggacttcaggcgctcttgggaagaggacttaagacactctccg
gaggaggatttcaggcactctcgggaggaggactggaggcggccacctgaggaggatttc
aggcggcctcccaaggaagacttcaggagaccccctgaggaggactggaggcgggccccc
cagggagacttcaggaggccacctgaggaggattggagacggcctcctgaggaggacttc
agacggcttcccccaggggaatggaggcggccacctgaggaagacttcaggcggccccct
gaggaggatttcaggcgacttccagaggaagacttccggcgacctcccgaggaggacttc
aggcggccccacgaggaggacttcaggcggtctcctgaggaggatttccggcggtctcct
gagaaggacttcaggcggccacctgcggaacacttccggcggccacccctggagcatttc
cggaggccgcccccggagcacttccgtcggccacctcaggagcatttccggcggccgccc
ccagagcatttcagacggccaccccaggagcatttcagacggccgccgcaggaacatttc
aggcggccatcccaggagcatttcaggcgcccccgagaggaagattttaggcactcactg
gatgaagatttcaggggtcctccagatgaagactttaggcaccctcctgatgaggacttc
aggaatccccaggaggaagattttagaagcccttccgatgaggacttcaggcggctcccg
gaggaagacctcagggaagctccagaggaggaccctagacttactgacagttttaggctt
cctggtgaggagtttaggagcccccctgatgattttagaagtcatcgcccttttgtgaat
tttggtcgcccagaaggtggcaagtttgattttggaaagcgtaatatgggaagttttcct
gaggggagatttatgcctgatccaaaattaaattgtaattcaggtagagtaacacccatt
aagataatgaatcttccatttaaagctaatgttaatgaaattctagactttttccatggt
tacagaattatacctgattcagtttcaatacagtataacgagcaaggattacctacaggg
gaagccattgttgccatgataaactacaatgaagctatggctgctattaaagatctgaat
gataggccagttggcccccgcaaagttaagttaattttgctctag
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