Phocoena sinus (vaquita): 116742320
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Entry
116742320 CDS
T07759
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04820
Cytoskeleton in muscle cells
psiu05410
Hypertrophic cardiomyopathy
psiu05412
Arrhythmogenic right ventricular cardiomyopathy
psiu05414
Dilated cardiomyopathy
psiu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116742320 (SNTB1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
116742320 (SNTB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
116742320 (SNTB1)
05414 Dilated cardiomyopathy
116742320 (SNTB1)
05416 Viral myocarditis
116742320 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
116742320
NCBI-ProteinID:
XP_032465639
Ensembl:
ENSPSNG00000010977
UniProt:
A0A8C9C2N1
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Position
17:complement(61013697..61239717)
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AA seq
539 aa
AA seq
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MAVAAAAAAAAGPAGGGGGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAAYNG
IGTATNGSFCRGAGAGHPGAGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQE
LGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQA
LKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSGSSDPLSSQSFSFHR
DRKSIPLKMCFVTRSMALADPENRQLEIHSPDAKHTVILRSKDSATAQAWFTAIHCNVSD
LLTRVITEVREQLGKMGIAGSREIRHLGWLAEKVPGDSEKQWKPALVVLTEKDLLIYDNM
PRRKEAWFSPVHTYPLLATRLVHSGPGKGSPQAGVDLSFATRTGTRQGIETHLFRAEISR
DLSHWTRSIVQGCHNSAELTIEVTTACTYKNQECRLTIHYENGFSIITEPQEGVFPKTII
QAPYEKLKMSSDDGIRMLYLDFGGKDGELQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcggcggcagcggcggccgggccggccggcgggggaggcggccga
gcgcagcggagcgggctgctggaagttttggtgcgggatcgctggcacaaagttctggtg
aacttgagcgaggacgccctggttctgagctgcgaggagggcgctgcggcgtacaacggc
atcgggaccgccaccaatggctcgttctgcaggggtgccggcgcggggcacccgggcgcg
ggcggcgcgcagcccccggactcgcccgccggggtccgcaccgccttcaccgacctgccc
gagcaggtgcccgagtctatctcgaaccagaagcgcggcgtgaaggtgctgaagcaggag
ctgggcgggctgggcatcagcatcaaggggggcaaggagaacaagatgcccatcctcatc
agcaagatcttcaaggggctggcggcggaccaaacgcaagccctgtacgtaggggacgcc
atcctgtccgtaaacggggccgacctgcgggacgccacccacgacgaggcggtgcaggcg
ctgaagcgcgctggcaaggaagtgctgctggaagtgaagtatatgcgggaagccacaccc
tacgtgaagaaaggctccccagtatccgagatcgggtgggaaacgcctccgccagaatcc
cctcggttaggcagcgggtcctcagatcctctgtcatcgcagtccttctccttccataga
gaccggaaaagcatccctctcaagatgtgcttcgtcactcggagcatggccttggctgac
cctgagaacaggcagcttgaaatccactctccagatgctaagcacacggtgatcctgaga
agcaaggactcggccactgcccaggcctggttcactgccatccattgcaacgtcagtgac
ctgctcacccgagtgatcaccgaggtccgagagcagctggggaagatgggcattgctggg
agccgggagatcaggcatcttggctggcttgcagagaaggtgcccggggacagcgagaaa
cagtggaagccagccctggttgtgctgactgagaaggaccttctaatttatgacaacatg
ccacggaggaaggaagcctggttcagcccagtgcacacgtaccctcttcttgccaccagg
ctggtccattcaggtccagggaaaggatcaccccaggctggtgtagatctgtcctttgca
acacgaactggtaccaggcagggtattgaaacgcatctcttcagggctgagatcagcagg
gacctctcacattggacaaggagcatagtacaggggtgccataattcagctgaactcact
attgaagtcaccacagcttgcacctataaaaaccaggagtgccggttgaccatacattat
gagaatggattttctattatcactgaaccacaggagggtgtctttcccaagacaatcata
caggctccttatgaaaagctgaaaatgtcttcagatgatggaatcaggatgctgtattta
gattttggaggcaaagatggagagcttcaactggaccttcattcctgccccaagccgatt
gttttcatcattcattccttcctgtcagctaagattacaaggctggggttggtggcctga
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