Phocoena sinus (vaquita): 116742379
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Entry
116742379 CDS
T07759
Symbol
WASHC5
Name
(RefSeq) WASH complex subunit 5 isoform X1
KO
K18464
WASH complex subunit strumpellin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116742379 (WASHC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116742379 (WASHC5)
Membrane trafficking [BR:
psiu04131
]
Protein recycling
Others
WASH complex
116742379 (WASHC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
Motif
Other DBs
NCBI-GeneID:
116742379
NCBI-ProteinID:
XP_032465828
Ensembl:
ENSPSNG00000014412
UniProt:
A0A8C9C6N6
LinkDB
All DBs
Position
17:complement(64741806..64797032)
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AA seq
1159 aa
AA seq
DB search
MLDFLAENNLCGQAILRIVSCGNAIIAELLRLSEFIPAVFRLKDRADQQKYGDIIFDFSY
FKGPELWESKLEAKPELQDLDEEFRENNTEIVTRFYLAFQSVHKYIVDLNRYLDDLNEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEIRERMLVSYYRYSAARSSAD
SNMDDICKLLRSTGYSSQPGAKRPPSYPDSYFQRVPINETFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVILYFEPSILHTHQAKMREIVDKYFPDNWVISIYMGITVNL
ADAWEPYKAAKTALNNTLDLSNVREQASRYATVSERAHAQAQQFLKEGCLREDLVLDNIP
RLLNCLRDCNVTIRWLMLHTADSACDPNNKRLRQIKDQILTDSRYNPKILFQLLLDTAQF
EFILKEMFKQMLSEKQAKWEHYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREIS
KQILSLNYDDSTAAGRKTVQLIQALEEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSFAWQLIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQYYSGELVSYVRKVLQIIPESMFTSLLKIIKLQTHDIIEVPTRLDKDK
LRDYAQLGPRYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAF
ALHRGLIFNPRAKPSELMPKLKELGATMDGFHRSFEYIQDYVNIYGLKIWQEEVSRIINY
NVEQECNNFLRTKIQDWQSMYQSTHIPIPKFTPVDESVTFIGRLCREILRITDPKMTCHI
DQLNTWYDMKTHQEVTSSRLFSEIQNTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKIIL
RDRTVQDTLKTLMNAISPLKSIVANSNKIYFSAIAKTQKIWTAYLEAIMKVGQMQILRQQ
IANELNYSCRFDSKHLAAALENLNKALLADIEAHYQDPSLPYPKEDNTLLYEITAYLEAA
GIHNPLNKIYITTKRLPYFPVVNFLFLIAQLPKLQYSKNLGMVCRKPADPVDWPPLVLGL
LTLLKQFHSRYTEQFLALIGQFIRSTVEQCTSQKIPEMPADVVGALLFLEDYVRYTKLPR
RVAEAHVPNFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgttggactttttggctgagaataacctctgtggccaagcaatcctaagaattgtttcc
tgtggcaatgccatcattgctgaacttctgaggctctctgagtttattcctgctgtattc
aggttaaaagaccgagctgatcaacagaaatacggagatatcatatttgatttcagctat
tttaagggtccagaattatgggaaagcaaactggaagctaagccagagctacaggattta
gatgaagagtttcgggaaaacaacacagaaattgtgaccagattttatttagcatttcaa
agtgtgcataaatatattgtagacttaaacaggtatctagatgatctcaatgaaggtgtt
tatattcagcaaaccttggaaacggtgcttctcaatgaagatggaaaacaacttctatgt
gaagcactgtacctatatggagttatgctcctggtcatcgaccaaaagattgaaggagaa
atcagagagagaatgctcgtttcttactatcgatacagtgctgctcgatcttctgctgat
tcgaatatggatgatatttgtaagctgcttcgaagtacaggttattccagccaaccagga
gccaaaagaccacccagctatcctgacagttacttccagagggtgcctatcaacgagacc
ttcatcagcatggtcatcggtcggctaagatctgatgatatttataaccaggtctcagcg
tatccattgccagaacatcggagcacagctctggcaaatcaggccgccatgttgtatgta
attctctactttgagccttccattcttcatacccatcaagcaaaaatgagagagatagtg
gataaatactttccagataattgggtcattagtatttacatggggatcacagttaatcta
gcagatgcttgggaaccctacaaagctgcaaaaactgctttaaacaataccctggacctt
tcaaacgtcagagaacaggcaagcagatacgctactgtcagcgaaagggcgcacgcacaa
gcgcagcagttcctgaaagaaggttgtttgagggaggatctggttctggataacatcccg
aggcttctgaactgcctgagagactgcaatgtcaccattcgatggctgatgcttcatacc
gcagactcagcctgtgacccaaacaacaaacgccttcgtcaaatcaaggaccagattcta
acagactctaggtacaatccgaagatcctctttcaattgctgttggatactgcacaattt
gagtttatactcaaagagatgttcaagcaaatgctttcggaaaagcaggccaaatgggaa
cattacaagaaggagggctcagagcggatgacggagcttgctgatgtcttttcaggagtg
aaacccctaaccagagtggagaaaaatgaaaatcttcaagcttggttcagagagatctca
aaacaaatattgtctttaaattatgatgattctactgctgcgggcagaaaaactgtgcaa
ctaatacaggctttggaagaggttcaagaatttcaccagttggaatcaaatctgcaagtg
tgtcagtttcttgctgatactcgcaagtttctccaccaaatgatccgaaccattaacatt
aaagaggaggtcctgatcacaatgcagatcgttggggacctttcttttgcttggcagtta
attgacagtttcacatctatcatgcaagagagcataagggtaaacccatccatggtcact
aaactcagagctacattcctaaagcttgcctctgcccttgacctgccccttctccgtatt
aatcaagcaaatagccctgaccttctcagtgtatctcaatattattctggcgaattggtg
tcctatgtgagaaaggttttgcagatcattccggaaagcatgtttacttcccttctaaag
atcataaagcttcagacccacgatatcattgaagtgccaacccggctggacaaggacaag
ctgagggactatgcccagcttggcccaagatatgaggttgccaagcttactcatgctatt
tccatttttactgaaggcatcttaatgatgaaaacaactttggtcggcatcatcaaggtg
gacccaaaacaactgctggaggatggaataaggaaggagctggttaagcgtgtggctttt
gctcttcataggggattgatcttcaaccctcgagccaagccaagtgaattgatgccaaag
ctgaaagagctgggagctaccatggatgggttccatcgttcttttgaatacattcaggac
tatgtcaacatttacggtctgaagatttggcaggaagaagtatctcgtattataaattac
aatgtggaacaagagtgtaataacttcctaagaacaaagattcaagactggcaaagtatg
taccagtccacacatattccaataccaaagtttacccctgtggatgagtccgtaacattt
attggtagactctgcagagaaatcttgcggatcacggacccaaaaatgacatgccacatt
gaccagctgaacacttggtatgatatgaaaacccatcaagaggtgactagcagccgcctc
ttctcagaaatccagaacaccttggggactttcggtctgaatgggttagacaggcttctg
tgctttatgattgtcaaagagttacagaatttcctcagcatgtttcagaaaattatcttg
cgagacagaactgtgcaggatactttaaaaaccctcatgaatgccatcagccccctaaaa
agcattgtagcaaattcgaataaaatttatttttctgccattgccaaaacacagaagata
tggaccgcttatctggaagctatcatgaaggttgggcagatgcagattctgagacaacag
attgccaatgaattaaattattcttgtcggtttgactccaaacatctggcagctgctttg
gagaatctcaataaggctctcctagcagatattgaagcccactaccaggacccttcactt
ccttaccccaaagaagataacacactcttatatgaaatcacagcctacctggaggcagct
ggcatccacaacccactgaacaagatatacataacgacaaagcgcttaccctacttcccg
gttgtcaactttctatttttgattgcccagttgccaaaacttcagtacagcaaaaacctc
ggcatggtctgccgaaaacctgccgaccctgtggactggccgccactcgtgctgggactg
ctcaccctgctgaagcagtttcattcccggtacacagaacagttcctggcattgatcggc
cagtttatccgctccacagtggagcagtgtacaagccagaagataccagaaatgcctgca
gatgttgtgggtgcccttctgtttctggaggattatgttcggtacacaaagctacccagg
agggttgctgaagcacacgtgcctaatttcatttttgatgagttcagaacagtcctgtga
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